RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SLCO3A1Q9UIG8 710 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 IKZF3Q9UKT9 509 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 WNT6Q9Y6F9 365 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 PLXNA2O75051 1894 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 IGLV3-16A0A075B6K0 115 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 CFAP99D6REC4 459 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 QSOX1O00391 747 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 KPNA5O15131 536 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 TRIM16O95361 564 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 NFATC1O95644 943 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 SNRPB2P08579 225 aaKnown RBP11.11□□□□□ -0.63
LIG3-204ENST00000585740 C1SP09871 688 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 TSPAN8P19075 237 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 UGT1A6P19224 532 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 UGT1A1P22309 533 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 UGT1A4P22310 534 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 XPAP23025 273 aaPredicted RBP11.11□□□□□ -0.63
LIG3-204ENST00000585740 UGT1A3P35503 534 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 UGT1A5P35504 534 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 PIK3CGP48736 1102 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 DGKGP49619 791 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 HK3P52790 923 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 ST8SIA6P61647 398 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 PTSQ03393 145 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 GRIK2Q13002 908 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 MMEL1Q495T6 779 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 AGKQ53H12 422 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 GPRC6AQ5T6X5 926 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 OGFOD2Q6N063 350 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 GPRIN3Q6ZVF9 776 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 Q6ZVU0 165 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 TSPAN33Q86UF1 283 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 DDIASQ8IXT1 998 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 CHST14Q8NCH0 376 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 GPR26Q8NDV2 337 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 OR2A12Q8NGT7 310 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 FRS2Q8WU20 508 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 UBTD2Q8WUN7 234 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 VOPP1Q96AW1 172 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 RSRC1Q96IZ7 334 aaKnown RBP11.11□□□□□ -0.63
LIG3-204ENST00000585740 CLPTM1LQ96KA5 538 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 BOCQ9BWV1 1114 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 AKTIPQ9H8T0 292 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 SEMA4BQ9NPR2 832 aaPredicted RBP11.11□□□□□ -0.63
LIG3-204ENST00000585740 SMOXQ9NWM0 555 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 B4GALT6Q9UBX8 382 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 IL36AQ9UHA7 158 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 SLC27A6Q9Y2P4 619 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 DNAJC15Q9Y5T4 150 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 NCOR1O75376 2440 aa11.11□□□□□ -0.63
LIG3-204ENST00000585740 A0A0U1RQS6 177 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 LRRC14BA6NHZ5 514 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 IQCF5A8MTL0 148 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 UPK3BL1B0FP48 263 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 UPK3BL2E5RIL1 263 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 PIP5K1BO14986 540 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 FFAR2O15552 330 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 AP2A2O94973 939 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 MATN4O95460 622 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 CYP17A1P05093 508 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 MPC1LP0DKB6 136 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 IDO1P14902 403 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 VCLP18206 1134 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 LHCGRP22888 699 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 PTDSS1P48651 473 aaKnown RBP11.1□□□□□ -0.63
LIG3-204ENST00000585740 DUSP6Q16828 381 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 KIF19Q2TAC6 998 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 ZNF805Q5CZA5 627 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 PRMT9Q6P2P2 845 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 SBSNQ6UWP8 590 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 SPNS2Q8IVW8 549 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 MIER2Q8N344 545 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 TCAIMQ8N3R3 496 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 PCYOX1LQ8NBM8 494 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 TSPEARQ8WU66 669 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 ING5Q8WYH8 240 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 TUBGCP3Q96CW5 907 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 DCUN1D1Q96GG9 259 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 MARK4Q96L34 752 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 MRGPRX3Q96LB0 322 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 ZSWIM3Q96MP5 696 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 NSUN5Q96P11 429 aaKnown RBP11.1□□□□□ -0.63
LIG3-204ENST00000585740 CDCA3Q99618 268 aaPredicted RBP11.1□□□□□ -0.63
LIG3-204ENST00000585740 SFXN1Q9H9B4 322 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 WDR41Q9HAD4 459 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 S100A14Q9HCY8 104 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 SARDHQ9UL12 918 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 POMPQ9Y244 141 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 NDUFAF1Q9Y375 327 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 LRRC42Q9Y546 428 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 PRSS21Q9Y6M0 314 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 XIRP2A4UGR9 3374 aa11.1□□□□□ -0.63
LIG3-204ENST00000585740 PABPN1LA6NDY0 278 aaKnown RBP11.09□□□□□ -0.63
LIG3-204ENST00000585740 NCF1BA6NI72 391 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms