RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 DUSP3P51452 185 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-215ENST00000584944 CTBSQ01459 385 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 HSP90AA5PQ58FG0 334 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 ZCCHC8Q6NZY4 707 aaKnown RBP13.66□□□□□ -0.22
TRAF4-215ENST00000584944 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 PIANPQ8IYJ0 282 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 TRIM56Q9BRZ2 755 aaKnown RBP13.66□□□□□ -0.22
TRAF4-215ENST00000584944 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
TRAF4-215ENST00000584944 IARS2Q9NSE4 1012 aaKnown RBP13.66□□□□□ -0.22
TRAF4-215ENST00000584944 SIRPGQ9P1W8 387 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 GNPTGQ9UJJ9 305 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 TMPRSS11EQ9UL52 423 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 KCNK6Q9Y257 313 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 TEX264Q9Y6I9 313 aa13.66□□□□□ -0.22
TRAF4-215ENST00000584944 TRBV5-4A0A0C4DH59 114 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 SRRM3A6NNA2 597 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 AGAP14A8MT82 685 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 E5RI56 91 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 PRMT5O14744 637 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 TPP1O14773 563 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CHUKO15111 745 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 YY2O15391 372 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 ZW10O43264 779 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 SH3BP5O60239 455 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 POP7O75817 140 aaKnown RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 LDOC1O95751 146 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 GSTM1P09488 218 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 PRSS56P0CW18 603 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 ERVK-10P10266 1014 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 OGNP20774 298 aaKnown RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 MCM3P25205 808 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 MAGEA4P43358 317 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 EIF3BP55884 814 aaKnown RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 GSTM4Q03013 218 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 TMED2Q15363 201 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 SHBQ15464 509 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 TRADDQ15628 312 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 KHDC1Q4VXA5 237 aaKnown RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CCDC157Q569K6 752 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 PACS1Q6VY07 963 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 UNC5AQ6ZN44 842 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 LDB1Q86U70 411 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 TRIM48Q8IWZ4 208 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 SLC25A45Q8N413 288 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CHCHD4Q8N4Q1 142 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CLDN19Q8N6F1 224 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 OR4C6Q8NH72 309 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 SEC14L1Q92503 715 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CERS2Q96G23 380 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 SCARF2Q96GP6 870 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CNDP2Q96KP4 475 aaKnown RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CAMK1GQ96NX5 476 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 FCRL3Q96P31 734 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 TIMM29Q9BSF4 260 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 CCM2Q9BSQ5 444 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 INTS10Q9NVR2 710 aaKnown RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 IL1RAPL1Q9NZN1 696 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 TAAR2Q9P1P5 351 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
TRAF4-215ENST00000584944 DNMT3AQ9Y6K1 912 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-215ENST00000584944 ZCWPW2A0A1B0GU75 182 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 E7ESA3 106 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 H3BMM5 538 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 SIGLEC6O43699 453 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 SPAG6O75602 509 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 GSTA2P09210 222 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 SLC35G4P0C7Q5 338 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 AK4P27144 223 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 STX2P32856 288 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 MGAT5Q09328 741 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 KRT33BQ14525 404 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 SLMAPQ14BN4 828 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 FASTKD3Q14CZ7 662 aaKnown RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 NR0B2Q15466 257 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 BCL7AQ4VC05 210 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 ZDHHC24Q6UX98 284 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 C3orf62Q6ZUJ4 267 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 RAB44Q7Z6P3 723 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 CILP2Q8IUL8 1156 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 IGDCC3Q8IVU1 814 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 BEND7Q8N7W2 519 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 AVL9Q8NBF6 648 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 GPR150Q8NGU9 434 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 ZDHHC1Q8WTX9 485 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 ZCCHC14Q8WYQ9 949 aaKnown RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 BOCQ9BWV1 1114 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 ZMYND15Q9H091 742 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 NSMCE4AQ9NXX6 385 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 MARCH4Q9P2E8 410 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 PNMA8BQ9ULN7 279 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-215ENST00000584944 CRYL1Q9Y2S2 319 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 CABIN1Q9Y6J0 2220 aa13.64□□□□□ -0.23
TRAF4-215ENST00000584944 IGLV3-16A0A075B6K0 115 aa13.63□□□□□ -0.23
TRAF4-215ENST00000584944 MGAT4DA6NG13 374 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms