RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 EPB41L1Q9H4G0 881 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 PRAMEF33A0A0G2JMD5 474 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 LILRA5A6NI73 299 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 ERI2A8K979 691 aaKnown RBP20.05■□□□□ 0.8
SS18-224ENST00000584083 A8MU76 341 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 CEP104O60308 925 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 PRAMEF10O60809 474 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 FGGP02679 453 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 MC4RP32245 332 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 DMPKQ09013 629 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 NFE2L1Q14494 772 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 CCNG2Q16589 344 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 ZRANB3Q5FWF4 1079 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 TMEM164Q5U3C3 297 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 PPP1R21Q6ZMI0 780 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 SNX20Q7Z614 316 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 PRUNE1Q86TP1 453 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 NXPE1Q8N323 547 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 BEND7Q8N7W2 519 aaPredicted RBP20.05■□□□□ 0.8
SS18-224ENST00000584083 OR52K1Q8NGK4 314 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 STYXQ8WUJ0 223 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 NAT14Q8WUY8 206 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 MAIP1Q8WWC4 291 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 FCRL3Q96P31 734 aaPredicted RBP20.05■□□□□ 0.8
SS18-224ENST00000584083 COPS8Q99627 209 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 UCK1Q9HA47 277 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 RAB6BQ9NRW1 208 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 POT1Q9NUX5 634 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 NLE1Q9NVX2 485 aaPredicted RBP20.05■□□□□ 0.8
SS18-224ENST00000584083 FAM8A1Q9UBU6 413 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 PSMD13Q9UNM6 376 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 WDR37Q9Y2I8 494 aa20.05■□□□□ 0.8
SS18-224ENST00000584083 LAMA5O15230 3695 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 CCDC78A2IDD5 438 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 GOLGA6L3A6NEY3 463 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 CFAP99D6REC4 459 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 TYRP1P17643 537 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 AMD1P17707 334 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 CXCR5P32302 372 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 UCNP55089 124 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 CXADRP78310 365 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 CLCA4Q14CN2 919 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 SIX1Q15475 284 aaPredicted RBP20.04■□□□□ 0.8
SS18-224ENST00000584083 GPR33Q49SQ1 333 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 FAM83HQ6ZRV2 1179 aaPredicted RBP20.04■□□□□ 0.8
SS18-224ENST00000584083 TAS2R42Q7RTR8 314 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 HEXDCQ8WVB3 486 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 PRORYQ9H606 182 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 PAK5Q9P286 719 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 PDP2Q9P2J9 529 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 KLHL3Q9UH77 587 aa20.04■□□□□ 0.8
SS18-224ENST00000584083 MGAT4DA6NG13 374 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 AGAP14A8MT82 685 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 UBXN7O94888 489 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 ZSCAN5DPP0CG00 497 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 FGF3P11487 239 aaPredicted RBP20.03■□□□□ 0.8
SS18-224ENST00000584083 TMPRSS3P57727 454 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 CDH17Q12864 832 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 CLN3Q13286 438 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 CCDC38Q502W7 563 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 GSTA5Q7RTV2 222 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 FAM129CQ86XR2 697 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 PLXDC1Q8IUK5 500 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 CDKN2AIPNLQ96HQ2 116 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 CPNE5Q9HCH3 593 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 SLC40A1Q9NP59 571 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 ZKSCAN5Q9Y2L8 839 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 PIKFYVEQ9Y2I7 2098 aa20.03■□□□□ 0.8
SS18-224ENST00000584083 C9orf172C9J069 976 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 H7C0S8 307 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 APRTP07741 180 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 ATP1B2P14415 290 aaPredicted RBP20.02■□□□□ 0.8
SS18-224ENST00000584083 RPL22P35268 128 aaKnown RBP20.02■□□□□ 0.8
SS18-224ENST00000584083 CDKN1CP49918 316 aaPredicted RBP20.02■□□□□ 0.8
SS18-224ENST00000584083 SEMA5AQ13591 1074 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 GPR18Q14330 331 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 SKIDA1Q1XH10 827 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 BCL7AQ4VC05 210 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 METRNLQ641Q3 311 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 MICALCLQ6ZW33 695 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 GPR155Q7Z3F1 870 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 SERPINA9Q86WD7 417 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 RBM12BQ8IXT5 1001 aaKnown RBP20.02■□□□□ 0.8
SS18-224ENST00000584083 GLIS1Q8NBF1 620 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 OR2L2Q8NH16 312 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 ART4Q93070 314 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 TAAR9Q96RI9 348 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 SLC39A1Q9NY26 324 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 ZDHHC3Q9NYG2 299 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 FOXJ2Q9P0K8 574 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 ACSL6Q9UKU0 697 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 DRG1Q9Y295 367 aaKnown RBP20.02■□□□□ 0.8
SS18-224ENST00000584083 AHCTF1Q8WYP5 2266 aa20.02■□□□□ 0.8
SS18-224ENST00000584083 KLHL33A6NCF5 533 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 MROH6A6NGR9 719 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 EFCAB7A8K855 629 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 SUN1O94901 812 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 POLBP06746 335 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 CACNG1Q06432 222 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 LAMB3Q13751 1172 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms