RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 STXBP5Q5T5C0 1151 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 UNQ6126/PRO20091Q6UXV3 157 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 Q75L30 129 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 ADGRA1Q86SQ6 560 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 FBXO39Q8N4B4 442 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 GBGT1Q8N5D6 347 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 SPATA20Q8TB22 786 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 ZFAND2BQ8WV99 257 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF622Q969S3 477 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 PHF21AQ96BD5 680 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 TTC14Q96N46 770 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 IL17FQ96PD4 163 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 SELENONQ9NZV5 590 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 PCDHAC2Q9Y5I4 1007 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 OR2M5A3KFT3 312 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 H0YIN7 160 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 EIF3DO15371 548 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 PLOD3O60568 738 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 WDR1O75083 606 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 BMP10O95393 424 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 KRT19P08727 400 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 FAM106CPP0CH98 169 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 FGF3P11487 239 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 VPREB1P12018 145 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 GJA1P17302 382 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 NR2F2P24468 414 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 TKTP29401 623 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 CCKBRP32239 447 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 IL15P40933 162 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 FUT6P51993 359 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 ASIC2Q16515 512 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 DHRS7BQ6IAN0 325 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 SLC30A6Q6NXT4 461 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 FAM171BQ6P995 826 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 MEPCEQ7L2J0 689 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 GUF1Q8N442 669 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 WDR20Q8TBZ3 569 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 TMEM255BQ8WV15 326 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 SORCS1Q8WY21 1168 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 LPGAT1Q92604 370 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 DUX5Q96PT3 197 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 SERINC2Q96SA4 455 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 CCDC106Q9BWC9 280 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 TXLNGYQ9BZA5 131 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 DDX31Q9H8H2 851 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 SLC35C2Q9NQQ7 365 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 TAB2Q9NYJ8 693 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 TRPV2Q9Y5S1 764 aa5.39□□□□□ -1.55
SMARCE1-219ENST00000583294 ZCWPW2A0A1B0GU75 182 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 MAGEB17A8MXT2 336 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 PRAC2D3DTV9 90 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 TULP2O00295 520 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 CREG1O75629 220 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 WISP2O76076 250 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 ABCB1P08183 1280 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 DNASE1P24855 282 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 UBXN2AP68543 259 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 TMEM211Q6ICI0 200 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 TEX38Q6PEX7 206 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 SPSB3Q6PJ21 355 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 ZNF704Q6ZNC4 412 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 TUBA1AQ71U36 451 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 SLC9B2Q86UD5 537 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 POMGNT2Q8NAT1 580 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 SECTM1Q8WVN6 248 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 LINGO1Q96FE5 620 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 OXNAD1Q96HP4 312 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 FAM81BQ96LP2 452 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 TUBA1CQ9BQE3 449 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 NEURL2Q9BR09 285 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 MRPL1Q9BYD6 325 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 MMP27Q9H306 513 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 GOLPH3LQ9H4A5 285 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 RETREG1Q9H6L5 497 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 EBF2Q9HAK2 575 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 TRPC7Q9HCX4 862 aa5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 MBNL1Q9NR56 388 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 MARCH4Q9P2E8 410 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-219ENST00000583294 ACOT8O14734 319 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 PSMD10O75832 226 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 GABRA5P31644 462 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 ZNF132P52740 706 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 CDH13P55290 713 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 EEF1A1P68104 462 aaKnown RBP5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 SIRPAP78324 504 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 MELKQ14680 651 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 RASA2Q15283 850 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 RAB6CQ53S08 254 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 EEF1A1P5Q5VTE0 462 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 CAPRIN2Q6IMN6 1127 aaKnown RBP5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 KIAA1161Q6NSJ0 714 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 ADIPOR2Q86V24 386 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 CEP57Q86XR8 500 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 POGLUT1Q8NBL1 392 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 CCDC191Q8NCU4 936 aa5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 RBM15BQ8NDT2 890 aaKnown RBP5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 LNX1Q8TBB1 728 aaPredicted RBP5.37□□□□□ -1.55
SMARCE1-219ENST00000583294 TAS1R2Q8TE23 839 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms