RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 LAMA3Q16787 3333 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 A0A1B0GTW7 788 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 STX16O14662 325 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 FZD6O60353 706 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ESRRBO95718 433 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 MLYCDO95822 493 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CDH2P19022 906 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ITGALP20701 1170 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CA5AP35218 305 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CLCN4P51793 760 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 AMIGO2Q86SJ2 522 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 DDX53Q86TM3 631 aaKnown RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 IFNEQ86WN2 208 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ALG14Q96F25 216 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 EGFL8Q99944 293 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CORO1BQ9BR76 489 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 TMEM165Q9HC07 324 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 MAGEE1Q9HCI5 957 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 TLR9Q9NR96 1032 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CEPT1Q9Y6K0 416 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 TANC1Q9C0D5 1861 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 PRRC2BQ5JSZ5 2229 aaKnown RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ANAPC1Q9H1A4 1944 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 TGM5O43548 720 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 GREM1O60565 184 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 RNASEH2AO75792 299 aaKnown RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CNPP09543 421 aaKnown RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 HNF1BP35680 557 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ATP4BP51164 291 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 NR1H2P55055 460 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 KLHL35Q6PF15 583 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 Q6ZNB5 142 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 OTOP2Q7RTS6 562 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 TICAM1Q8IUC6 712 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 PHYKPLQ8IUZ5 450 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 CMTM8Q8IZV2 173 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 VPS33AQ96AX1 596 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 EME1Q96AY2 570 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 HSPBAP1Q96EW2 488 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 C17orf80Q9BSJ5 609 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 NOL11Q9H8H0 719 aaKnown RBP13.5□□□□□ -0.25
SRSF1-205ENST00000582730 EGFL7Q9UHF1 273 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 RIMS3Q9UJD0 308 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 TBX21Q9UL17 535 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 AP4S1Q9Y587 144 aa13.5□□□□□ -0.25
SRSF1-205ENST00000582730 ZNF839A8K0R7 811 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ZBBXA8MT70 800 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 H7C0S8 307 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 LATS1O95835 1130 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 IGSF6O95976 241 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 CLCN7P51798 805 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 LRRC73Q5JTD7 316 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 BORAQ6PGQ7 559 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 TSPAN33Q86UF1 283 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ALDH16A1Q8IZ83 802 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 LKAAEAR1Q8TD35 194 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 VWCEQ96DN2 955 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ZNF225Q9UK10 706 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 HEMK1Q9Y5R4 338 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-205ENST00000582730 SNX13Q9Y5W8 968 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 TRIM24O15164 1050 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 SLC25A14O95258 325 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-205ENST00000582730 CYBBP04839 570 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 UROSP10746 265 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 IDO1P14902 403 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 CTSOP43234 321 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-205ENST00000582730 KCNK10P57789 538 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 SFSWAPQ12872 951 aaKnown RBP13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ZNF554Q86TJ5 538 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 METTL6Q8TCB7 284 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ASIC4Q96FT7 647 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 ATP13A3Q9H7F0 1226 aa13.49□□□□□ -0.25
SRSF1-205ENST00000582730 E2F3O00716 465 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 TRBC1P01850 177 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 C8AP07357 584 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 GRIA3P42263 894 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 MAGEA10P43363 369 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-205ENST00000582730 NRF1Q16656 503 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 FUT11Q495W5 492 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 DHFR2Q86XF0 187 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 MYO1HQ8N1T3 1032 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 LRTOMTQ8WZ04 291 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 P2RY12Q9H244 342 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 LIN28AQ9H9Z2 209 aaKnown RBP13.48□□□□□ -0.25
SRSF1-205ENST00000582730 LATS2Q9NRM7 1088 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 ABCB8Q9NUT2 735 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 ZMYM5Q9UJ78 669 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 AURKCQ9UQB9 309 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 DHRS7Q9Y394 339 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 PCDHB1Q9Y5F3 818 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 PRSS21Q9Y6M0 314 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 TRAV19A0A0A6YYK7 116 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 GLYATL1P3A0A0U1RQE8 302 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
SRSF1-205ENST00000582730 ABHD14A-ACY1A0A1B0GW23 586 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms