RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	BUD23	O43709	281 aa	Known RBP	12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	LIAS	O43766	372 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PRAMEF10	O60809	474 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	METTL18	O95568	372 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	GAS8	O95995	478 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	C9	P02748	559 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FGF3	P11487	239 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	BRAF	P15056	766 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ITIH1	P19827	911 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	AKT1	P31749	480 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FDFT1	P37268	417 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ETV5	P41161	510 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	MAPK10	P53779	464 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CXADR	P78310	365 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	XIAP	P98170	497 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SOWAHC	Q53LP3	525 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	DCAF12	Q5T6F0	453 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	METRNL	Q641Q3	311 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TMEM220	Q6QAJ8	160 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	XKR5	Q6UX68	686 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CCDC81	Q6ZN84	652 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	DTX1	Q86Y01	620 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	LRRC8A	Q8IWT6	810 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	NXPE1	Q8N323	547 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	OR2L2	Q8NH16	312 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	STYX	Q8WUJ0	223 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	MAIP1	Q8WWC4	291 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	NCSTN	Q92542	709 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CXorf40B	Q96DE9	158 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	COPS8	Q99627	209 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	APOL2	Q9BQE5	337 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TMEM121	Q9BTD3	319 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ZMYND15	Q9H091	742 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	VPS37B	Q9H9H4	285 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FBXO8	Q9NRD0	319 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	NLE1	Q9NVX2	485 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	RIMKLB	Q9ULI2	386 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	DNAJC16	Q9Y2G8	782 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SLC30A1	Q9Y6M5	507 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	LOC400499	M0QZD8	3231 aa		12.36	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	IGLV3-16	A0A075B6K0	115 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TRBV5-4	A0A0C4DH59	114 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TCRBV7S2A1N4T	A0A589	114 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ATXN7	O15265	892 aa	Predicted RBP	12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	UBXN7	O94888	489 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SUN1	O94901	812 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CCL4	P13236	92 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PPM1F	P49593	454 aa	Predicted RBP	12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CTSC	P53634	463 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	MC2R	Q01718	297 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CDH17	Q12864	832 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CCNG2	Q16589	344 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SKIDA1	Q1XH10	827 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PLA2G4E	Q3MJ16	856 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CYB5D1	Q6P9G0	228 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	BMPER	Q8N8U9	685 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	RCBTB1	Q8NDN9	531 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	OR13C4	Q8NGS5	318 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PEX13	Q92968	403 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ZDHHC12	Q96GR4	267 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CRELD1	Q96HD1	420 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CCM2	Q9BSQ5	444 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	HOMER3	Q9NSC5	361 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SLC39A1	Q9NY26	324 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FKBPL	Q9UIM3	349 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CRLS1	Q9UJA2	301 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	RALY	Q9UKM9	306 aa	Known RBP	12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ZNF148	Q9UQR1	794 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CFAP46	Q8IYW2	2715 aa		12.35	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	MROH6	A6NGR9	719 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	OR2AG2	A6NM03	316 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	EIF4E1B	A6NMX2	242 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	AP3B1	O00203	1094 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	QSOX1	O00391	747 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ATP1B2	P14415	290 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	AMD1	P17707	334 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	RPL10	P27635	214 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	NDUFS1	P28331	727 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CAPZB	P47756	277 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PRLHR	P49683	370 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ATP1A2	P50993	1020 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	GDF10	P55107	478 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	GPR18	Q14330	331 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FNBP1L	Q5T0N5	605 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CEACAM20	Q6UY09	585 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	NLRP9	Q7RTR0	991 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ZNF761	Q86XN6	746 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CARF	Q8N187	725 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	C9orf72	Q96LT7	481 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TBC1D10A	Q9BXI6	508 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ZDHHC3	Q9NYG2	299 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TMEM9	Q9P0T7	183 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PAK5	Q9P286	719 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	DRG1	Q9Y295	367 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	KCTD3	Q9Y597	815 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	HEBP2	Q9Y5Z4	205 aa		12.34	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	ATM	Q13315	3056 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms