RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TPH1P17752 444 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 RPL10P27635 214 aaKnown RBP14.57□□□□□ -0.08
SS18-212ENST00000579061 MC4RP32245 332 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 TMPRSS15P98073 1019 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 POU6F1Q14863 301 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 SKIDA1Q1XH10 827 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 FNBP1LQ5T0N5 605 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 BROXQ5VW32 411 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 METRNLQ641Q3 311 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 PDZD3Q86UT5 571 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 SGF29Q96ES7 293 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 CDKN2AIPNLQ96HQ2 116 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 RANBP9Q96S59 729 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 COPS8Q99627 209 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 PRORYQ9H606 182 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 RAB6BQ9NRW1 208 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 RIMKLBQ9ULI2 386 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 IGLV3-16A0A075B6K0 115 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CEP104O60308 925 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 HGFP14210 728 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 ITIH1P19827 911 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CD82P27701 267 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CSTF2P33240 577 aaKnown RBP eCLIP14.56□□□□□ -0.08
SS18-212ENST00000579061 ETV5P41161 510 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 LMAN1P49257 510 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 PPM1FP49593 454 aaPredicted RBP14.56□□□□□ -0.08
SS18-212ENST00000579061 PRLHRP49683 370 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CACNG1Q06432 222 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 SEPT6Q14141 434 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CLCA4Q14CN2 919 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 SEPT7Q16181 437 aaKnown RBP14.56□□□□□ -0.08
SS18-212ENST00000579061 TMEM164Q5U3C3 297 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 ARHGAP22Q7Z5H3 698 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 JAMLQ86YT9 394 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 PLXDC1Q8IUK5 500 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 TAB3Q8N5C8 712 aaPredicted RBP14.56□□□□□ -0.08
SS18-212ENST00000579061 BEND7Q8N7W2 519 aaPredicted RBP14.56□□□□□ -0.08
SS18-212ENST00000579061 DNAAF3Q8N9W5 541 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 RCBTB1Q8NDN9 531 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 OR52K1Q8NGK4 314 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 OR2L2Q8NH16 312 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CXorf40BQ96DE9 158 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 NAF1Q96HR8 494 aaKnown RBP14.56□□□□□ -0.08
SS18-212ENST00000579061 TBC1D10AQ9BXI6 508 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 SLC40A1Q9NP59 571 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 CASS4Q9NQ75 786 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 ZDHHC3Q9NYG2 299 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 TMEM9Q9P0T7 183 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 ACSL5Q9ULC5 683 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 WDR37Q9Y2I8 494 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 JRKLQ9Y4A0 524 aa14.56□□□□□ -0.08
SS18-212ENST00000579061 MN1Q10571 1320 aaPredicted RBP14.56□□□□□ -0.08
SS18-212ENST00000579061 C17orf113A0A1B0GUU1 675 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 HEATR9A2RTY3 570 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 B4E171 279 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 SGTAO43765 313 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 UBXN7O94888 489 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 ATP1B2P14415 290 aaPredicted RBP14.55□□□□□ -0.08
SS18-212ENST00000579061 ETS1P14921 441 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 ACRV1P26436 265 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 RPL22P35268 128 aaKnown RBP14.55□□□□□ -0.08
SS18-212ENST00000579061 TSPAN7P41732 249 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 DRG2P55039 364 aaKnown RBP14.55□□□□□ -0.08
SS18-212ENST00000579061 NFE2L1Q14494 772 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 ZRANB3Q5FWF4 1079 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 PPP1R21Q6ZMI0 780 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 DET1Q7L5Y6 550 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 NLRP9Q7RTR0 991 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 RASGEF1CQ8N431 466 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 GLIS1Q8NBF1 620 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 NCSTNQ92542 709 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 PEX13Q92968 403 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 USP7Q93009 1102 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 PBKQ96KB5 322 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 TAAR9Q96RI9 348 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 EIF2B3Q9NR50 452 aaKnown RBP14.55□□□□□ -0.08
SS18-212ENST00000579061 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.55□□□□□ -0.08
SS18-212ENST00000579061 PCDHGA3Q9Y5H0 932 aa14.55□□□□□ -0.08
SS18-212ENST00000579061 PRAMEF33A0A0G2JMD5 474 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 OR52A4PA6NMU1 304 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 CCL22O00626 93 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 KLK10O43240 276 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 PRAMEF10O60809 474 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 C9P02748 559 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 APRTP07741 180 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 GSTM1P09488 218 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 ANKRD34CP0C6C1 535 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 FGF3P11487 239 aaPredicted RBP14.54□□□□□ -0.08
SS18-212ENST00000579061 CCL4P13236 92 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 ADRA1DP25100 572 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 MAPK9P45984 424 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 MAPK10P53779 464 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 TMPRSS3P57727 454 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 GSTM4Q03013 218 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 RPE65Q16518 533 aa14.54□□□□□ -0.08
SS18-212ENST00000579061 FAM83HQ6ZRV2 1179 aaPredicted RBP14.54□□□□□ -0.08
SS18-212ENST00000579061 SERPINA9Q86WD7 417 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms