RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	PCSK4	Q6UW60	755 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PPP1R21	Q6ZMI0	780 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	GSTA5	Q7RTV2	222 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PRUNE1	Q86TP1	453 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	NXPE1	Q8N323	547 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OR4D9	Q8NGE8	314 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PEX13	Q92968	403 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CDKN2AIPNL	Q96HQ2	116 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	LINC00615	Q96LM1	132 aa	Predicted RBP	13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	FOXP3	Q9BZS1	431 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	EPB41L1	Q9H4G0	881 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ASCL3	Q9NQ33	180 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CRLS1	Q9UJA2	301 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	DNAJC16	Q9Y2G8	782 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SLC30A1	Q9Y6M5	507 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	IGLV3-16	A0A075B6K0	115 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	HEATR9	A2RTY3	570 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CFAP99	D6REC4	459 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	AP3B1	O00203	1094 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	BRAF	P15056	766 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ADRA1D	P25100	572 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RBMS1	P29558	406 aa	Known RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	MC4R	P32245	332 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	KCNJ1	P48048	391 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CDK16	Q00536	496 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CACNG1	Q06432	222 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CCDC173	Q0VFZ6	552 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SEPT6	Q14141	434 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CYP1B1	Q16678	543 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PLA2G4E	Q3MJ16	856 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	METRNL	Q641Q3	311 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	WDR74	Q6RFH5	385 aa	Predicted RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	USP53	Q70EK8	1073 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RAB11FIP2	Q7L804	512 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	NLRP9	Q7RTR0	991 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TMPRSS9	Q7Z410	1059 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SPACA3	Q8IXA5	215 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RBM12B	Q8IXT5	1001 aa	Known RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SLC35F6	Q8N357	371 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OR2L2	Q8NH16	312 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OR10G6	Q8NH81	332 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ACTRT1	Q8TDG2	376 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SGF29	Q96ES7	293 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	DCUN1D1	Q96GG9	259 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	COPS8	Q99627	209 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CMKLR1	Q99788	373 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RDH14	Q9HBH5	336 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	THSD1	Q9NS62	852 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	POT1	Q9NUX5	634 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PIH1D1	Q9NWS0	290 aa	Known RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TRMT1	Q9NXH9	659 aa	Known RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZDHHC3	Q9NYG2	299 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PDP2	Q9P2J9	529 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SNX12	Q9UMY4	172 aa		13.4	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	MGAT4D	A6NG13	374 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	LILRA5	A6NI73	299 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	OR2AG2	A6NM03	316 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	PDZK1P1	A8MUH7	402 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	CDRT15L2	A8MXV6	281 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	PGRMC1	O00264	195 aa	Known RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	CCL22	O00626	93 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	PLD2	O14939	933 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	HGS	O14964	777 aa	Predicted RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	SGTA	O43765	313 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	DUX1	O43812	170 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	ITGA2B	P08514	1039 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	ATP1B2	P14415	290 aa	Predicted RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	ACRV1	P26436	265 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	RPL10	P27635	214 aa	Known RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	SLC19A1	P41440	591 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	GRIA1	P42261	906 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	LIMK2	P53671	638 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	TMPRSS3	P57727	454 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	ACVR1	Q04771	509 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	FNBP1L	Q5T0N5	605 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	TMEM71	Q6P5X7	295 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	CLEC14A	Q86T13	490 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	FBXO39	Q8N4B4	442 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	BEND7	Q8N7W2	519 aa	Predicted RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	ZNF248	Q8NDW4	579 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	AHCYL2	Q96HN2	611 aa	Known RBP	13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	SGSM3	Q96HU1	749 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	MS4A14	Q96JA4	679 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	OSBPL9	Q96SU4	736 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	NUDT22	Q9BRQ3	303 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	SEMA6C	Q9H3T2	930 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	EPB41L5	Q9HCM4	733 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	ACSL5	Q9ULC5	683 aa		13.39	□□□□□ -0.27
CSNK1D-208	ENST00000578501	UNC13C	Q8NB66	2214 aa		13.38	□□□□□ -0.27
CSNK1D-208	ENST00000578501	IGHV5-10-1	A0A0J9YXX1	117 aa		13.38	□□□□□ -0.27
CSNK1D-208	ENST00000578501	C17orf113	A0A1B0GUU1	675 aa		13.38	□□□□□ -0.27
CSNK1D-208	ENST00000578501	TNFSF15	O95150	251 aa		13.38	□□□□□ -0.27
CSNK1D-208	ENST00000578501	WISP1	O95388	367 aa		13.38	□□□□□ -0.27
CSNK1D-208	ENST00000578501	VIP	P01282	170 aa		13.38	□□□□□ -0.27

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