RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ABRAXAS1Q6UWZ7 409 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 TRIM48Q8IWZ4 208 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 UNC5BQ8IZJ1 945 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 EXTL1Q92935 676 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 NKD1Q969G9 470 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SH3KBP1Q96B97 665 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 RTP4Q96DX8 246 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 TMEM121Q9BTD3 319 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 ASB8Q9H765 288 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SLC40A1Q9NP59 571 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 AKAP7Q9P0M2 348 aaPredicted RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 LILRA5A6NI73 299 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 OR5K4A6NMS3 321 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 CAPN5O15484 640 aaPredicted RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 LDB2O43679 373 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 ZIC2O95409 532 aaPredicted RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 SLC2A4P14672 509 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 ZNF28P17035 718 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 AMD1P17707 334 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 CDC25BP30305 580 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 ZNF140P52738 457 aaPredicted RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 EPHA4P54764 986 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 RHDQ02161 417 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 RPE65Q16518 533 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 LDLRAP1Q5SW96 308 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 TMEM164Q5U3C3 297 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 KCTD11Q693B1 232 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 FAM92BQ6ZTR7 304 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 TIPARPQ7Z3E1 657 aaKnown RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 AMZ2Q86W34 360 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 EXD3Q8N9H8 876 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 CXorf40BQ96DE9 158 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 ELMO2Q96JJ3 720 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 DNAJC1Q96KC8 554 aaKnown RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.66□□□□□ -0.54
LITAF-219ENST00000576334 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 AAR2Q9Y312 384 aaKnown RBP11.66□□□□□ -0.54
LITAF-219ENST00000576334 PCDHGA3Q9Y5H0 932 aa11.66□□□□□ -0.54
LITAF-219ENST00000576334 MN1Q10571 1320 aaPredicted RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 C5orf60A6NFR6 353 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 C2orf81A6NN90 581 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 B4E171 279 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 STMND1H3BQB6 276 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 PYCARD-AS1I3L0S3 204 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 STK10O94804 968 aaKnown RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 POLBP06746 335 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 ETS1P14921 441 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 LIFP15018 202 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 MSH3P20585 1137 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 TSPAN7P41732 249 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 MC2RQ01718 297 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 ITGA9Q13797 1035 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 PRPSAP1Q14558 356 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 POU6F1Q14863 301 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 DCAF12Q5T6F0 453 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 AGAP9Q5VTM2 703 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 ZDHHC20Q5W0Z9 365 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 WASH2PQ6VEQ5 465 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 CERS6Q6ZMG9 384 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 ARHGEF18Q6ZSZ5 1173 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 KLHDC8BQ8IXV7 354 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 UBL4BQ8N7F7 174 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 GLIS1Q8NBF1 620 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 DTX3LQ8TDB6 740 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 BRSK1Q8TDC3 778 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 CALR3Q96L12 384 aaKnown RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 C9orf72Q96LT7 481 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 INSM2Q96T92 566 aaPredicted RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 DPYSL5Q9BPU6 564 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 DDA1Q9BW61 102 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 SPRY4Q9C004 299 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 WWP1Q9H0M0 922 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 WASH6PQ9NQA3 447 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 SIDT1Q9NXL6 827 aaKnown RBP11.65□□□□□ -0.54
LITAF-219ENST00000576334 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 PILRAQ9UKJ1 303 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 PCDHB11Q9Y5F2 797 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
LITAF-219ENST00000576334 TENM4Q6N022 2769 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 LOC101059948A0A1B0GTJ6 334 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 OR51F1A6NGY5 319 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 MIF4GDA9UHW6 222 aaKnown RBP11.64□□□□□ -0.55
LITAF-219ENST00000576334 TK2O00142 265 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 RAD1O60671 282 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 RASSF9O75901 435 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 C9P02748 559 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 MC4RP32245 332 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 CETN2P41208 172 aa11.64□□□□□ -0.55
LITAF-219ENST00000576334 GRIA1P42261 906 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms