RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	AGAP9	Q5VTM2	703 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	BROX	Q5VW32	411 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	INO80C	Q6PI98	192 aa	Predicted RBP	13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	ARHGEF18	Q6ZSZ5	1173 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	TMEM26	Q6ZUK4	368 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	GLIS1	Q8NBF1	620 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	AGBL5	Q8NDL9	886 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	SNRNP27	Q8WVK2	155 aa	Known RBP	13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	C1orf54	Q8WWF1	131 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	ART4	Q93070	314 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	SH3KBP1	Q96B97	665 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	RTP4	Q96DX8	246 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	TTC25	Q96NG3	672 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	TLR10	Q9BXR5	811 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	KLHL3	Q9UH77	587 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	PSMD13	Q9UNM6	376 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	B3GALT1	Q9Y5Z6	326 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	ZFYVE26	Q68DK2	2539 aa		13.91	□□□□□ -0.18
EDC4-210	ENST00000575507	LILRA5	A6NI73	299 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	EFCAB7	A8K855	629 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	DUX1	O43812	170 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	CRTAM	O95727	393 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	VIP	P01282	170 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	SLC2A4	P14672	509 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	GRIA1	P42261	906 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	EPHA4	P54764	986 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	DMPK	Q09013	629 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	GTF2H3	Q13889	308 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	AMZ2	Q86W34	360 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	JPH3	Q8WXH2	748 aa	Predicted RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	DNAJC1	Q96KC8	554 aa	Known RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	TAAR9	Q96RI9	348 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	CCNL2	Q96S94	520 aa	Predicted RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	DPYSL5	Q9BPU6	564 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	SPRY4	Q9C004	299 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	UCK1	Q9HA47	277 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	APMAP	Q9HDC9	416 aa		13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.9	□□□□□ -0.18
EDC4-210	ENST00000575507	TEX51	A0A1B0GUA7	166 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	CCDC78	A2IDD5	438 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	CTAGE9	A4FU28	777 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	KIF1C	O43896	1103 aa	Known RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	AP2A1	O95782	977 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	C9	P02748	559 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	LIPC	P11150	499 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	MSH3	P20585	1137 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	PBLD	P30039	288 aa	Predicted RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	CSTF2	P33240	577 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	LEPR	P48357	1165 aa	Known RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	PPM1F	P49593	454 aa	Predicted RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	UCN	P55089	124 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	SNX1	Q13596	522 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	GPR18	Q14330	331 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	RPE65	Q16518	533 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	KIAA1614	Q5VZ46	1190 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	METRNL	Q641Q3	311 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	ANKS6	Q68DC2	871 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	CCDC81	Q6ZN84	652 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	VASH2	Q86V25	355 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	OR52K1	Q8NGK4	314 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	GPR150	Q8NGU9	434 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	RSC1A1	Q92681	617 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	UBL7	Q96S82	380 aa	Predicted RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	INSM2	Q96T92	566 aa	Predicted RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	NAPG	Q99747	312 aa	Predicted RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	CTRC	Q99895	268 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	STN1	Q9H668	368 aa	Known RBP	13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	ETNK1	Q9HBU6	452 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	WDR70	Q9NW82	654 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	SLC39A1	Q9NY26	324 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507	PCDHGA3	Q9Y5H0	932 aa		13.89	□□□□□ -0.19
EDC4-210	ENST00000575507		B4E171	279 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	ATXN7	O15265	892 aa	Predicted RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	KCNJ13	O60928	360 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	C1QL1	O75973	258 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	UBXN7	O94888	489 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	ZSCAN5DP	P0CG00	497 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	AKT1	P31749	480 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	STIP1	P31948	543 aa	Known RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	TSPAN7	P41732	249 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	PPP1CA	P62136	330 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	MC2R	Q01718	297 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	POU6F1	Q14863	301 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	ZNF658B	Q4V348	819 aa	Predicted RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	FAM129C	Q86XR2	697 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	PIANP	Q8IYJ0	282 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	NXPE1	Q8N323	547 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	TTC9	Q92623	222 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	NKD1	Q969G9	470 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	RNF31	Q96EP0	1072 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	CDKN2AIPNL	Q96HQ2	116 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	C9orf72	Q96LT7	481 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	C16orf45	Q96MC5	204 aa	Predicted RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	B3GNT4	Q9C0J1	378 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	LRRC40	Q9H9A6	602 aa		13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	POT1	Q9NUX5	634 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms