RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 A8MX80 341 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 MEN1O00255 615 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 PEX12O00623 359 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 SOCS6O14544 535 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 CBFA2T2O43439 604 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 KLRC4O43908 158 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 SNX2O60749 519 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 SRGAP2O75044 1071 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 UBXN7O94888 489 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 TOXO94900 526 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 IGSF6O95976 241 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 HOXD4P09016 255 aaPredicted RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 ELFN1P0C7U0 828 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 EBLN1P0CF75 366 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 UNGP13051 313 aaPredicted RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 ACADSBP45954 432 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 RPL34P49207 117 aaKnown RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 CXCR3P49682 368 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 IDH3AP50213 366 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 GEMIN4P57678 1058 aaKnown RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 LSM11P83369 360 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD3-213ENST00000571249 CDK3Q00526 305 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 RBPJQ06330 500 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 CUL2Q13617 745 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 ACOX1Q15067 660 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 CFAP58Q5T655 872 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 ZNF658Q5TYW1 1059 aaPredicted RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 KRT39Q6A163 491 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 TMEM214Q6NUQ4 689 aaKnown RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 RPUSD3Q6P087 351 aaKnown RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 PAMR1Q6UXH9 720 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 LIPIQ6XZB0 460 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 MARK2Q7KZI7 788 aaKnown RBP6.76□□□□□ -1.33
CHD3-213ENST00000571249 ZSWIM9Q86XI8 627 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 TMEM126BQ8IUX1 230 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 DRC7Q8IY82 874 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 ZZZ3Q8IYH5 903 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 GRAMD1CQ8IYS0 662 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 CELF2-AS1Q8N7Q2 184 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 HCAR2Q8TDS4 363 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 FNIP1Q8TF40 1166 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 RHOVQ96L33 236 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 NCAPGQ9BPX3 1015 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 C7orf25Q9BPX7 421 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 RNF32Q9H0A6 362 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 KCNF1Q9H3M0 494 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 THAP9Q9H5L6 903 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 RASSF1Q9NS23 344 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 KCND1Q9NSA2 647 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 RAB20Q9NX57 234 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 CPNE7Q9UBL6 633 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 ZNF212Q9UDV6 495 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 TBC1D29Q9UFV1 150 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 MFHAS1Q9Y4C4 1052 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
CHD3-213ENST00000571249 CXorf51AA0A1B0GTR3 108 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 PVALEFA0A1B0GWK0 134 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GOLGA6CA6NDK9 693 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GOLGA6BA6NDN3 693 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 LRRC10BA6NIK2 292 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 FAM90A27PA6NNH2 459 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 E5RJQ4 531 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 I6L893 689 aaPredicted RBP6.75□□□□□ -1.33
CHD3-213ENST00000571249 ADAM10O14672 748 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 LDB2O43679 373 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 BUB1O43683 1085 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GRAP2O75791 330 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 TMCC1O94876 653 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 IGHEP01854 428 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 PF4P02776 101 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 RAF1P04049 648 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 PAEPP09466 180 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GOLGA6DP0CG33 693 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 KRT13P13646 458 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 UGT1A4P22310 534 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 PPP1R2P41236 205 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GPD2P43304 727 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 TERF1P54274 439 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 SOX8P57073 446 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GSDMDP57764 484 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 RHOAP61586 193 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 YWHAEP62258 255 aaKnown RBP6.75□□□□□ -1.33
CHD3-213ENST00000571249 ACY1Q03154 408 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 LRP8Q14114 963 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 KEAP1Q14145 624 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 SYCP1Q15431 976 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 FXNQ16595 210 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 PYCR3Q53H96 274 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 CDKAL1Q5VV42 579 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 AFMIDQ63HM1 303 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 IRGCQ6NXR0 463 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 TMEM270Q6UE05 265 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 FAM198BQ6UWH4 519 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 LINC00696Q6ZRV3 163 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 UNC13DQ70J99 1090 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 INTS8Q75QN2 995 aaKnown RBP6.75□□□□□ -1.33
CHD3-213ENST00000571249 DSELQ8IZU8 1212 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 GOLM1Q8NBJ4 401 aa6.75□□□□□ -1.33
CHD3-213ENST00000571249 FBXL13Q8NEE6 735 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms