RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 OR13J1Q8NGT2 312 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 GRK7Q8WTQ7 553 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 AHCYL2Q96HN2 611 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 LINC00615Q96LM1 132 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 BFARQ9NZS9 450 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF624Q9P2J8 865 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 TCAF1Q9Y4C2 921 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 IGLV3-16A0A075B6K0 115 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 CCDC162PA2VCL2 907 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 SRRM3A6NNA2 597 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 SGTAO43765 313 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 DXOO77932 396 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 HALP42357 657 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 FNTAP49354 379 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 VPS41P49754 854 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 EPHA4P54764 986 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 SESN2P58004 480 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 SARNPP82979 210 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 ACVR1Q04771 509 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 NFE2L1Q14494 772 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 CLCA4Q14CN2 919 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 NKAIN2Q5VXU1 208 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 PAPD7Q5XG87 772 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 IGF2-ASQ6U949 168 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 RAB11FIP2Q7L804 512 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF761Q86XN6 746 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 SLITRK4Q8IW52 837 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 PIANPQ8IYJ0 282 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 OR2L2Q8NH16 312 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 OR10G6Q8NH81 332 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 HDAC10Q969S8 669 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 TMEM159Q96B96 161 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF578Q96N58 590 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 SLC46A1Q96NT5 459 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 NAPGQ99747 312 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 NUDT22Q9BRQ3 303 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 IL22Q9GZX6 179 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 UCK1Q9HA47 277 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 CHRAC1Q9NRG0 131 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 POT1Q9NUX5 634 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 ACSL5Q9ULC5 683 aa13.56□□□□□ -0.24
HERPUD1-218ENST00000569569 C17orf113A0A1B0GUU1 675 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 A0A1W2PNU3 283 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 TCRBV7S3A2A0A539 114 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 OR51F1A6NGY5 319 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 DUX1O43812 170 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 GOT2P00505 430 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 RBMS1P29558 406 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 PBLDP30039 288 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 FOXN2P32314 431 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 NSG1P42857 185 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 MAGEA6P43360 314 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 PPM1FP49593 454 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 PRLHRP49683 370 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 LIMK2P53671 638 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 PRAMEP78395 509 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 ITIH4Q14624 930 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 KCNJ11Q14654 390 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 DBN1Q16643 649 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 KCTD19Q17RG1 926 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 TBC1D25Q3MII6 688 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 PHF19Q5T6S3 580 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 TMEM71Q6P5X7 295 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF574Q6ZN55 896 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 FAM83HQ6ZRV2 1179 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 TMEM26Q6ZUK4 368 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 RBM12BQ8IXT5 1001 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 FBXO39Q8N4B4 442 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 OR4D9Q8NGE8 314 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 OR6P1Q8NGX9 317 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 OR4L1Q8NH43 312 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 NAT14Q8WUY8 206 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 FGF11Q92914 225 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 CXorf40BQ96DE9 158 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 CCDC97Q96F63 343 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 PRR11Q96HE9 360 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 SGSM3Q96HU1 749 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 TTC1Q99614 292 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 EPB41L1Q9H4G0 881 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 VPS37BQ9H9H4 285 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 SLC2A6Q9UGQ3 507 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 WDR37Q9Y2I8 494 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 NEU2Q9Y3R4 380 aa13.55□□□□□ -0.24
HERPUD1-218ENST00000569569 SAR1BQ9Y6B6 198 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms