RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TRIM10Q9UDY6 481 aa19.8■□□□□ 0.76
CLN6-207ENST00000566347 TMEM184BQ9Y519 407 aaPredicted RBP19.8■□□□□ 0.76
CLN6-207ENST00000566347 DUSP10Q9Y6W6 482 aa19.8■□□□□ 0.76
CLN6-207ENST00000566347 BOD1L1Q8NFC6 3051 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 SPTA1P02549 2419 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 C5orf60A6NFR6 353 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ZNF891A8MT65 544 aaPredicted RBP19.79■□□□□ 0.76
CLN6-207ENST00000566347 J3QKU1 62 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 GAPDHSO14556 408 aaPredicted RBP19.79■□□□□ 0.76
CLN6-207ENST00000566347 GPR39O43194 453 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 POP7O75817 140 aaKnown RBP19.79■□□□□ 0.76
CLN6-207ENST00000566347 STK17BO94768 372 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 PRAMEF1O95521 474 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 MSH3P20585 1137 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 AKT1P31749 480 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 PDE1BQ01064 536 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 CLCA4Q14CN2 919 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 LONRF2Q1L5Z9 754 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ANKRD20A2Q5SQ80 823 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ANKRD20A1Q5TYW2 823 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ANKRD20A3Q5VUR7 823 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 DARS2Q6PI48 645 aaKnown RBP19.79■□□□□ 0.76
CLN6-207ENST00000566347 TMEM220Q6QAJ8 160 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 RANBP10Q6VN20 620 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ZNF398Q8TD17 642 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 LRRC45Q96CN5 670 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ZDHHC12Q96GR4 267 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 GORASP1Q9BQQ3 440 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ZNF768Q9H5H4 540 aaKnown RBP19.79■□□□□ 0.76
CLN6-207ENST00000566347 APMAPQ9HDC9 416 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 EPHA6Q9UF33 1036 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 WDR37Q9Y2I8 494 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ARL5AQ9Y689 179 aa19.79■□□□□ 0.76
CLN6-207ENST00000566347 ZNF106Q9H2Y7 1883 aaKnown RBP19.79■□□□□ 0.76
CLN6-207ENST00000566347 KLHL33A6NCF5 533 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 OR2AG2A6NM03 316 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 KCNN4O15554 427 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 RASSF9O75901 435 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 PSMB4P28070 264 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 ADRA1AP35348 466 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 VAV2P52735 878 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 CTSCP53634 463 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 ABHD18Q0P651 414 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 PRSS42Q7Z5A4 293 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 OR4K2Q8NGD2 314 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 SLC45A3Q96JT2 553 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 SPATA13Q96N96 652 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 LACRTQ9GZZ8 138 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 RAB33BQ9H082 229 aa19.78■□□□□ 0.76
CLN6-207ENST00000566347 GPN2Q9H9Y4 310 aaPredicted RBP19.78■□□□□ 0.76
CLN6-207ENST00000566347 REXO2Q9Y3B8 237 aaKnown RBP19.78■□□□□ 0.76
CLN6-207ENST00000566347 TLN1Q9Y490 2541 aaKnown RBP19.78■□□□□ 0.76
CLN6-207ENST00000566347 CRTAMO95727 393 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 FAM87AP0C7U9 286 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 LEPRP48357 1165 aaKnown RBP19.77■□□□□ 0.76
CLN6-207ENST00000566347 FOXM1Q08050 763 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 NFATC3Q12968 1075 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 MAP7Q14244 749 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 CYB5D1Q6P9G0 228 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 KLHL35Q6PF15 583 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 BORAQ6PGQ7 559 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 RAD9BQ6WBX8 426 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 TXLNBQ8N3L3 684 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 LRRC57Q8N9N7 239 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 RSC1A1Q92681 617 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 ALG3Q92685 438 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 CATSPER2Q96P56 530 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 C19orf43Q9BQ61 176 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 FAM117AQ9C073 453 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 RBSNQ9H1K0 784 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 STARD5Q9NSY2 213 aa19.77■□□□□ 0.76
CLN6-207ENST00000566347 FEZ2Q9UHY8 353 aaPredicted RBP19.77■□□□□ 0.76
CLN6-207ENST00000566347 SRP72O76094 671 aaKnown RBP19.76■□□□□ 0.75
CLN6-207ENST00000566347 DLGAP3O95886 979 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 PYGMP11217 842 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 CA5AP35218 305 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 SEPHS1P49903 392 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 NFE2L1Q14494 772 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 IL11RAQ14626 422 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 PTPRCAPQ14761 206 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 RPE65Q16518 533 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 FNBP1LQ5T0N5 605 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 CACHD1Q5VU97 1274 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 METRNLQ641Q3 311 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 IRGCQ6NXR0 463 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 FAM83HQ6ZRV2 1179 aaPredicted RBP19.76■□□□□ 0.75
CLN6-207ENST00000566347 TIPARPQ7Z3E1 657 aaKnown RBP19.76■□□□□ 0.75
CLN6-207ENST00000566347 KIAA1328Q86T90 577 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 ESX1Q8N693 406 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 UBL4BQ8N7F7 174 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 BEND7Q8N7W2 519 aaPredicted RBP19.76■□□□□ 0.75
CLN6-207ENST00000566347 ACRBPQ8NEB7 543 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 CCDC110Q8TBZ0 833 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 FAM118BQ9BPY3 351 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 APOL2Q9BQE5 337 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 ASB8Q9H765 288 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 AMFRQ9UKV5 643 aa19.76■□□□□ 0.75
CLN6-207ENST00000566347 HEMK1Q9Y5R4 338 aaPredicted RBP19.76■□□□□ 0.75
CLN6-207ENST00000566347 LOC101059948A0A1B0GTJ6 334 aa19.75■□□□□ 0.75
CLN6-207ENST00000566347 GRID2IPA4D2P6 1211 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms