RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 UCP2P55851 309 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 LAMB3Q13751 1172 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 HNRNPDQ14103 355 aaKnown RBP10.57□□□□□ -0.72
UBFD1-205ENST00000566136 DHX34Q14147 1143 aaKnown RBP10.57□□□□□ -0.72
UBFD1-205ENST00000566136 STXBP2Q15833 593 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 GAB4Q2WGN9 574 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 NEK5Q6P3R8 708 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 GPR142Q7Z601 462 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 EIF1ADQ8N9N8 165 aaKnown RBP10.57□□□□□ -0.72
UBFD1-205ENST00000566136 MARVELD3Q96A59 401 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 CAMK1GQ96NX5 476 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 SECISBP2Q96T21 854 aaKnown RBP10.57□□□□□ -0.72
UBFD1-205ENST00000566136 FAM83CQ9BQN1 747 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 UQCC2Q9BRT2 126 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 EGLN1Q9GZT9 426 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 BTBD7Q9P203 1132 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 ACSL6Q9UKU0 697 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 STK38LQ9Y2H1 464 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 SNX24Q9Y343 169 aa10.57□□□□□ -0.72
UBFD1-205ENST00000566136 SYNGAP1Q96PV0 1343 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 ATP2A1O14983 1001 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 HLA-DRAP01903 254 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 PCBP4P57723 403 aaKnown RBP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 MZT1Q08AG7 82 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 DMPKQ09013 629 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 OVGP1Q12889 678 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 CCL14Q16627 93 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 SEL1L2Q5TEA6 688 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 TTC27Q6P3X3 843 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 AFTPHQ6ULP2 937 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 PLEKHH3Q7Z736 793 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 PRELID2Q8N945 189 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 CPA5Q8WXQ8 436 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 MAGOHBQ96A72 148 aaKnown RBP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 GAL3ST4Q96RP7 486 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 NAP1L3Q99457 506 aaPredicted RBP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 GORASP1Q9BQQ3 440 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 CNOT8Q9UFF9 292 aaKnown RBP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 KCNK6Q9Y257 313 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 PCDHB7Q9Y5E2 793 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 ACOD1A6NK06 481 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 MIF4GDA9UHW6 222 aaKnown RBP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 EIF3HO15372 352 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 DYRK3O43781 588 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 EXTL3O43909 919 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 PCCBP05166 539 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 PRKCAP17252 672 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 NR1D1P20393 614 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 GTF2H1P32780 548 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 VCPP55072 806 aaKnown RBP10.56□□□□□ -0.72
UBFD1-205ENST00000566136 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 RCN1Q15293 331 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 USP37Q86T82 979 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 CCDC105Q8IYK2 499 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 SEC14L1Q92503 715 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 CD101Q93033 1021 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 DTD2Q96FN9 168 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 DPYSL5Q9BPU6 564 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 FERMT1Q9BQL6 677 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 TMBIM4Q9HC24 238 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 FAM114A2Q9NRY5 505 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 GDAP2Q9NXN4 497 aa10.56□□□□□ -0.72
UBFD1-205ENST00000566136 EBAG9O00559 213 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 GBAP04062 536 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 ODC1P11926 461 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 SDHBP21912 280 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 UBA1P22314 1058 aaKnown RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 FASLGP48023 281 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 DRP2Q13474 957 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 CBFBQ13951 182 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 USP10Q14694 798 aaKnown RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 ZMYND11Q15326 602 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 SH2D4BQ5SQS7 431 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 DUPD1Q68J44 220 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 SLFN12LQ6IEE8 588 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 PMF1Q6P1K2 205 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 RBM15BQ8NDT2 890 aaKnown RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 PSPC1Q8WXF1 523 aaKnown RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 ZNF707Q96C28 371 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 ZNF560Q96MR9 790 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 FMO2Q99518 471 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 HNRNPABQ99729 332 aaKnown RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 MS4A7Q9GZW8 240 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-205ENST00000566136 RAB17Q9H0T7 212 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 SETD4Q9NVD3 440 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 CRIM1Q9NZV1 1036 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 PMF1-BGLAPU3KQ54 211 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 GOLGA6L10A6NI86 522 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 OR2AG2A6NM03 316 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 K7ERI5 159 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 LIASO43766 372 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 VNN1O95497 513 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
UBFD1-205ENST00000566136 ERCC2P18074 760 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms