RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ZNF140P52738 457 aaPredicted RBP16.43■□□□□ 0.22
USB1-211ENST00000565662 CDH17Q12864 832 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 RPS6KA1Q15418 735 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 PLA2G4EQ3MJ16 856 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 SOWAHCQ53LP3 525 aaPredicted RBP16.43■□□□□ 0.22
USB1-211ENST00000565662 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
USB1-211ENST00000565662 KCTD11Q693B1 232 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 TMEM220Q6QAJ8 160 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 DTX1Q86Y01 620 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 FAM71DQ8N9W8 422 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 RCBTB1Q8NDN9 531 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 OR2L2Q8NH16 312 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 HM13Q8TCT9 377 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 GORASP1Q9BQQ3 440 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 SLC40A1Q9NP59 571 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 ARFGAP3Q9NP61 516 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 HOMER3Q9NSC5 361 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 RIMKLBQ9ULI2 386 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 GUCA1BQ9UMX6 200 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 PCYT1BQ9Y5K3 369 aaPredicted RBP16.43■□□□□ 0.22
USB1-211ENST00000565662 COLEC10Q9Y6Z7 277 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 AHCTF1Q8WYP5 2266 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 EFCAB7A8K855 629 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 C9orf172C9J069 976 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 F5H423 210 aaPredicted RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 POP7O75817 140 aaKnown RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 SLC35G4P0C7Q5 338 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 SFTPCP11686 197 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 SLC19A1P41440 591 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 PRLHRP49683 370 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 MC2RQ01718 297 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 PLOD1Q02809 727 aaPredicted RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 MAP7Q14244 749 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 SKIDA1Q1XH10 827 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 ARHGAP40Q5TG30 622 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 LYPLAL1Q5VWZ2 237 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 NKAIN2Q5VXU1 208 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 METRNLQ641Q3 311 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 NLRP9Q7RTR0 991 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 PRSS42Q7Z5A4 293 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 BPHLQ86WA6 291 aaPredicted RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 KMT5CQ86Y97 462 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 NXPE1Q8N323 547 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 CCDC89Q8N998 374 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 RASGEF1AQ8N9B8 481 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 SLC39A7Q92504 469 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 UBXN4Q92575 508 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 ART4Q93070 314 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 KIAA1143Q96AT1 154 aaPredicted RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 SGF29Q96ES7 293 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 NLE1Q9NVX2 485 aaPredicted RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 PAK5Q9P286 719 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 SLC23A2Q9UGH3 650 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 TMPRSS11EQ9UL52 423 aa16.42■□□□□ 0.22
USB1-211ENST00000565662 PACSIN2Q9UNF0 486 aaPredicted RBP16.42■□□□□ 0.22
USB1-211ENST00000565662 TRBV23OR9-2A0A075B6M9 112 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 HEATR9A2RTY3 570 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 E7EVH7 732 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 GAPDHSO14556 408 aaPredicted RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 POLR1CO15160 346 aaPredicted RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 AP2A2O94973 939 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 FGF3P11487 239 aaPredicted RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 HOXB3P14651 431 aaPredicted RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 RPL10P27635 214 aaKnown RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 MAP4P27816 1152 aaKnown RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 MAPK9P45984 424 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 LMAN1P49257 510 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 C19orf57Q0VDD7 668 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 RPA4Q13156 261 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 IL11RAQ14626 422 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 SEPT7Q16181 437 aaKnown RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 KHDC1Q4VXA5 237 aaKnown RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 ARMC3Q5W041 872 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 IL22RA1Q8N6P7 574 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 TMEM121Q9BTD3 319 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 ZNF768Q9H5H4 540 aaKnown RBP16.41■□□□□ 0.22
USB1-211ENST00000565662 CPNE5Q9HCH3 593 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 ZDHHC3Q9NYG2 299 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 TRIM10Q9UDY6 481 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 FKBPLQ9UIM3 349 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 ZNF148Q9UQR1 794 aa16.41■□□□□ 0.22
USB1-211ENST00000565662 OR2AG2A6NM03 316 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 IFRD1O00458 451 aaPredicted RBP16.4■□□□□ 0.22
USB1-211ENST00000565662 CASC3O15234 703 aaKnown RBP16.4■□□□□ 0.22
USB1-211ENST00000565662 LIASO43766 372 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 KDM1AO60341 852 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 UGT1A9O60656 530 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 ATP1B2P14415 290 aaPredicted RBP16.4■□□□□ 0.22
USB1-211ENST00000565662 BRAFP15056 766 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 UGT1A6P19224 532 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 UGT1A1P22309 533 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 UGT1A4P22310 534 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 UGT1A3P35503 534 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 ETV5P41161 510 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 XIAPP98170 497 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 CACNG1Q06432 222 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 ITIH4Q14624 930 aa16.4■□□□□ 0.22
USB1-211ENST00000565662 PLCL1Q15111 1095 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms