RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 AGAP9Q5VTM2 703 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 SYPL2Q5VXT5 272 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 MRPL14Q6P1L8 145 aaKnown RBP10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 BEND5Q7L4P6 421 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 LZTR1Q8N653 840 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 CCL19Q99731 98 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 FANCEQ9HB96 536 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 NDOR1Q9UHB4 597 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 NOL7Q9UMY1 257 aaKnown RBP10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 WBP11Q9Y2W2 641 aaKnown RBP10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 NPFFR2Q9Y5X5 522 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 HS3ST3B1Q9Y662 390 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 OR5H15A6NDH6 313 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 RHOBTB3O94955 611 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 TRUB2O95900 331 aaKnown RBP10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 HBQ1P09105 142 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 TEAD1P28347 426 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 UQCRC1P31930 480 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 GGCXP38435 758 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 RAD23BP54727 409 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 HMGN5P82970 282 aaKnown RBP10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 ZNF766Q5HY98 468 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 AFMIDQ63HM1 303 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 GDAP1L1Q96MZ0 367 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 FRMD6Q96NE9 622 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 REG4Q9BYZ8 158 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 SHARPINQ9H0F6 387 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 ESRP2Q9H6T0 727 aaKnown RBP10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 CDC23Q9UJX2 597 aa10.28□□□□□ -0.76
HDGFL3-204ENST00000563790 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.76
HDGFL3-204ENST00000563790 PIK3R2O00459 728 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 TTI1O43156 1089 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 ZBTB11O95625 1053 aaPredicted RBP10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 VIPP01282 170 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 SETSIPP0DME0 302 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 OR1E1P30953 314 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 CCR1P32246 355 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 NR1H2P55055 460 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 ARL6IP4Q66PJ3 421 aaKnown RBP10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 SHISA5Q8N114 240 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 OR11G2Q8NGC1 345 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 OR1L3Q8NH93 324 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 NUS1Q96E22 293 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 CD180Q99467 661 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC7A5P2Q9GIP4 190 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 HESX1Q9UBX0 185 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 TMEM98Q9Y2Y6 226 aa10.27□□□□□ -0.77
HDGFL3-204ENST00000563790 GRID2IPA4D2P6 1211 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 USP27XA6NNY8 438 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 LRRIQ3A6PVS8 624 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 CTIFO43310 598 aaKnown RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 SNX2O60749 519 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 FBXO21O94952 628 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 CYP1A1P04798 512 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 MSL3P1P0C860 447 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 CBSLP0DN79 551 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 PAX1P15863 534 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 FPR1P21462 350 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 CBSP35520 551 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC19A1P41440 591 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 ARSEP51690 589 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 GEMIN4P57678 1058 aaKnown RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 MTA1Q13330 715 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 ACOX1Q15067 660 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 POU4F3Q15319 338 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 WIPI1Q5MNZ9 446 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 ABHD17BQ5VST6 288 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 FBXO42Q6P3S6 717 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 BRAT1Q6PJG6 821 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 MARK2Q7KZI7 788 aaKnown RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 TFAP2DQ7Z6R9 452 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF683Q8IZ20 524 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 XXYLT1Q8NBI6 393 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 BRIX1Q8TDN6 353 aaKnown RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 PARD3BQ8TEW8 1205 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 COQ10AQ96MF6 247 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 KCNK17Q96T54 332 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 NIF3L1Q9GZT8 377 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 APOBEC3GQ9HC16 384 aaKnown RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 SYTL2Q9HCH5 934 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 KCTD5Q9NXV2 234 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 IFT80Q9P2H3 777 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF624Q9P2J8 865 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 CDYLQ9Y232 598 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 KCNK6Q9Y257 313 aa10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 PCYT1BQ9Y5K3 369 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-204ENST00000563790 KIAA1549Q9HCM3 1950 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 TUBAL3A6NHL2 446 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF749O43361 778 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 PIGNO95427 931 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 FDXRP22570 491 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 RGS7P49802 495 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 PITX1P78337 314 aaPredicted RBP10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 GPR18Q14330 331 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 DNTTIP2Q5QJE6 756 aaKnown RBP10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 HIBCHQ6NVY1 386 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms