RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ZFC3H1O60293 1989 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 IGF2RP11717 2491 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 A0A1W2PNU3 283 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 MGAT4DA6NG13 374 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 AP3B1O00203 1094 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 TTI1O43156 1089 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 OR1I1O60431 355 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 KCNJ13O60928 360 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 RPLP0P05388 317 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 ATP1B2P14415 290 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 RPL10P27635 214 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 CD1CP29017 333 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 AKT1P31749 480 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 SLC19A1P41440 591 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 PAFAH1B1P43034 410 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 PRLHRP49683 370 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 DRG2P55039 364 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 OR1D5P58170 312 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 MRPS25P82663 173 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 CFHR1Q03591 330 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 NFE2L1Q14494 772 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 CLCA4Q14CN2 919 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 MSS51Q4VC12 460 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 METRNLQ641Q3 311 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 AFTPHQ6ULP2 937 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 WASH2PQ6VEQ5 465 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 SYDE1Q6ZW31 735 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 LDB1Q86U70 411 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 TMEM135Q86UB9 458 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 AMZ2Q86W34 360 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 ZNF761Q86XN6 746 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 CCNJLQ8IV13 435 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 LILRA3Q8N6C8 439 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 Q8N9G6 341 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 OR2L2Q8NH16 312 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 OR4L1Q8NH43 312 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 HEXDCQ8WVB3 486 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 ZNF514Q96K75 400 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 C16orf45Q96MC5 204 aaPredicted RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 TTC25Q96NG3 672 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 KRT12Q99456 494 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 LRRN3Q9H3W5 708 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 OSGEPL1Q9H4B0 414 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 PLAC1Q9HBJ0 212 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 XAB2Q9HCS7 855 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 SARS2Q9NP81 518 aaKnown RBP8.39□□□□□ -1.07
UBR1-204ENST00000563239 WASH6PQ9NQA3 447 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 ASIC3Q9UHC3 531 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 CLCA2Q9UQC9 943 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 PCDHB1Q9Y5F3 818 aa8.39□□□□□ -1.07
UBR1-204ENST00000563239 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 IGHV1OR21-1A0A087WYE8 117 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 KIR2DS5A0A0G2JLQ3 304 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 A0A0G2JNG1 304 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 ZCWPW2A0A1B0GU75 182 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 FAM237BA0A1B0GVD1 139 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 TRABD2BA6NFA1 517 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 SDR42E2A6NKP2 422 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 OR52A4PA6NMU1 304 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 GOLGA8KD6RF30 607 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 GOLGA8TH3BQL2 631 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 KIR2DS3K7RE56 304 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 CD3EAPO15446 510 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 CSO75390 466 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 BANF1O75531 89 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 TCEA3O75764 348 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 C1QTNF9P0C862 333 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 HOXB3P14651 431 aaPredicted RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 JUPP14923 745 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 XRCC1P18887 633 aaPredicted RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 IDSP22304 550 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 GPR3P46089 330 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 SARNPP82979 210 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 C2orf54Q08AI8 447 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 SQSTM1Q13501 440 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 DHX34Q14147 1143 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 ITIH4Q14624 930 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 KIR2DS5Q14953 304 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 ST3GAL2Q16842 350 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 ISXQ2M1V0 245 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 ANKRD20A4Q4UJ75 823 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 NKAIN2Q5VXU1 208 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 IZUMO3Q5VZ72 239 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 ARMC3Q5W041 872 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 HIBCHQ6NVY1 386 aaPredicted RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 ZNF574Q6ZN55 896 aaPredicted RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 B3GNT8Q7Z7M8 397 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 HOOK3Q86VS8 718 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 IGDCC3Q8IVU1 814 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 EFCAB3Q8N7B9 438 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 OR6P1Q8NGX9 317 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 DCUN1D1Q96GG9 259 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 PWWP2AQ96N64 755 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 RUNDC3BQ96NL0 473 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 WDR83Q9BRX9 315 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 ABCG4Q9H172 646 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms