RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LINC00271P0C7V0 271 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 PLA2G2AP14555 144 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 DAOP14920 347 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 GJA1P17302 382 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 HIST1H2ADP20671 130 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 NMBRP28336 390 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 NPY4RP50391 375 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 PDLIM4P50479 330 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CCR3P51677 355 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 PLIN5Q00G26 463 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 FOXM1Q08050 763 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 HYAL1Q12794 435 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF155Q12901 538 aaPredicted RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 BAATQ14032 418 aaPredicted RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 C15orf59Q2T9L4 293 aaPredicted RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 FAM98BQ52LJ0 330 aaKnown RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 DCST1Q5T197 706 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 KRT39Q6A163 491 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 LCN10Q6JVE6 187 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 DUS1LQ6P1R4 473 aaKnown RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 BRAT1Q6PJG6 821 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 PPP1R21Q6ZMI0 780 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CCNI2Q6ZMN8 369 aaPredicted RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 HIST3H2AQ7L7L0 130 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 HAUS6Q7Z4H7 955 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 OR1J2Q8NGS2 313 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 SPATA22Q8NHS9 363 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CFAP61Q8NHU2 1237 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 PTPMT1Q8WUK0 201 aaPredicted RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 TANKQ92844 425 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 APBB2Q92870 758 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 MOAP1Q96BY2 351 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 RHBDF1Q96CC6 855 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 ORAI1Q96D31 301 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 RTP4Q96DX8 246 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF558Q96NG5 402 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF385AQ96PM9 386 aaKnown RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CSF3RQ99062 836 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 HGH1Q9BTY7 390 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 THUMPD3Q9BV44 507 aaKnown RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 C1QTNF1Q9BXJ1 281 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 RTN4RQ9BZR6 473 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CNOT10Q9H9A5 744 aaKnown RBP3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 EPB41L5Q9HCM4 733 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 STK39Q9UEW8 545 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 AMACRQ9UHK6 382 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 SIX4Q9UIU6 781 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 GTF3C4Q9UKN8 822 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 CCL27Q9Y4X3 112 aa3.19□□□□□ -1.9
SHCBP1-202ENST00000563219 MAP2K7O14733 419 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 MID1O15344 667 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 SLC7A4O43246 635 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 KDM4BO94953 1096 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CSPG5O95196 566 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 TPOP07202 933 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 QDPRP09417 244 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC175P0C221 793 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 MCCP23508 829 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 PTAFRP25105 342 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 MT3P25713 68 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 GABRA5P31644 462 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 APOBEC1P41238 236 aaKnown RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 ART1P52961 327 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 TAS2R38P59533 333 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CD81P60033 236 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CXCL9Q07325 125 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 SREBF2Q12772 1141 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 MAD2L1Q13257 205 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 NFE2L1Q14494 772 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 KIF19Q2TAC6 998 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 RARS2Q5T160 578 aaKnown RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 ALS2CLQ60I27 953 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 NSUN5P2Q63ZY6 315 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF324BQ6AW86 544 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 NADSYN1Q6IA69 706 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CHST3Q7LGC8 479 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 C16orf82Q7Z2V1 217 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC91Q7Z6B0 441 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CENPVQ7Z7K6 275 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 LDB1Q86U70 411 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CREBRFQ8IUR6 639 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC170Q8IYT3 715 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 RASGEF1CQ8N431 466 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 GUF1Q8N442 669 aaKnown RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 THAP6Q8TBB0 222 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 MGARPQ8TDB4 240 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 NUDCD2Q8WVJ2 157 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 LRRC59Q96AG4 307 aaKnown RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 BICD1Q96G01 975 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 C3orf30Q96M34 536 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 TTC14Q96N46 770 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF830Q96NB3 372 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 EDEM3Q9BZQ6 932 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 DDX31Q9H8H2 851 aaKnown RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 TBC1D17Q9HA65 648 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CHMP1AQ9HD42 196 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 PSD3Q9NYI0 1048 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 CRNNQ9UBG3 495 aaPredicted RBP3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 RASAL2Q9UJF2 1139 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 TMEM184BQ9Y519 407 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms