RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 INHAP05111 366 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 ALOX5P09917 674 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 SLURP2P0DP57 97 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 CPN2P22792 545 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 GRK6P43250 576 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 PLGLB1Q02325 96 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 CHIT1Q13231 466 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 NOMO1Q15155 1222 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 PTPN20Q4JDL3 420 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 HMCESQ96FZ2 354 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 TBATAQ96M53 351 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 TBC1D10AQ9BXI6 508 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 GSDMCQ9BYG8 508 aa11.14□□□□□ -0.63
RPAP1-204ENST00000562303 RCOR3Q9P2K3 495 aaPredicted RBP11.14□□□□□ -0.63
RPAP1-204ENST00000562303 KLRG2A4D1S0 409 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 ARL5CA6NH57 179 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 ALOX15BO15296 676 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CILPO75339 1184 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CCNCP24863 283 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 AP1S1P61966 158 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 OLR1P78380 273 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 UTS2BQ765I0 119 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 COX18Q8N8Q8 333 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 HSD17B14Q9BPX1 270 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 PCBD2Q9H0N5 130 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 MAGEH1Q9H213 219 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 GBA3Q9H227 469 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 PCDHA2Q9Y5H9 948 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 BCORL1Q5H9F3 1711 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 A0A1W2PPM1 405 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 SLC38A8A6NNN8 435 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 AREL1O15033 823 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 DDX3YO15523 660 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 TM7SF2O76062 418 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 SPATA31C1P0DKV0 1188 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 GDI2P50395 445 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 GJD3Q8N144 294 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 OR52J3Q8NH60 311 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 AZIN2Q96A70 460 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 NXNL1Q96CM4 212 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 C11orf24Q96F05 449 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CST11Q9H112 138 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 ABCB9Q9NP78 766 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 INTS10Q9NVR2 710 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 GRIP1Q9Y3R0 1128 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 LOC110117498-PIK3R3F6TDL0 507 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 FSCN2O14926 492 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 TSPAN1O60635 241 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 C2P06681 752 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CYP3A5P20815 502 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 HTR7P34969 479 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 INAVAQ3KP66 663 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 IL23RQ5VWK5 629 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 FAM92BQ6ZTR7 304 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 RASGRP3Q8IV61 690 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 HMGB4Q8WW32 186 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CPXM1Q96SM3 734 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 ACBD6Q9BR61 282 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 RTKNQ9BST9 563 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 FUCA2Q9BTY2 467 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 EBPLQ9BY08 206 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 MRPS30Q9NP92 439 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 TMEM150CB9EJG8 249 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 AP2A2O94973 939 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 SPPL2CQ8IUH8 684 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 LRRN4CLQ8ND94 238 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CLK4Q9HAZ1 481 aaKnown RBP11.13□□□□□ -0.63
RPAP1-204ENST00000562303 CHRAC1Q9NRG0 131 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 RAPGEFL1Q9UHV5 662 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 STOML2Q9UJZ1 356 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 DMTF1Q9Y222 760 aa11.13□□□□□ -0.63
RPAP1-204ENST00000562303 WTIPA6NIX2 430 aaPredicted RBP11.12□□□□□ -0.63
RPAP1-204ENST00000562303 BPGMP07738 259 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
RPAP1-204ENST00000562303 IGFBP5P24593 272 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 KCNJ5P48544 419 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 GALK1P51570 392 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 GTPBP2Q9BX10 602 aaKnown RBP11.12□□□□□ -0.63
RPAP1-204ENST00000562303 COMMD4Q9H0A8 199 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 SLIT1O75093 1534 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 NELFEP18615 380 aaKnown RBP11.12□□□□□ -0.63
RPAP1-204ENST00000562303 FOLH1Q04609 750 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 DLG1Q12959 904 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 ZMYND11Q15326 602 aa11.12□□□□□ -0.63
RPAP1-204ENST00000562303 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
RPAP1-204ENST00000562303 KCTD8Q6ZWB6 473 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms