RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	TTC41P	Q6P2S7	1318 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ROBO3	Q96MS0	1386 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	GOLGA6L10	A0A0M3HER8	536 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	hCG_1807616	A0A1W2PRN6	198 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	VGLL3	A8MV65	326 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	TEX22	C9J3V5	150 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ADAM10	O14672	748 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	POLR3G	O15318	223 aa	Predicted RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	TP73	O15350	636 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	RNF113A	O15541	343 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	RIPK2	O43353	540 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC25A17	O43808	307 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	NOL3	O60936	208 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	RBMXL2	O75526	392 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ERAL1	O75616	437 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	NEURL1	O76050	574 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	DDHD2	O94830	711 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRIM16	O95361	564 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PGM3	O95394	542 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	DDAH2	O95865	285 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PAH	P00439	452 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SERPINC1	P01008	464 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	GH2	P01242	217 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ATP5B	P06576	529 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ASNS	P08243	561 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	CTSA	P10619	480 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARF4	P18085	180 aa	Predicted RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	MX1	P20591	662 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	YWHAQ	P27348	245 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	POU1F1	P28069	291 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC16A2	P36021	539 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	TCF7	P36402	384 aa	Predicted RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	RGS19	P49795	217 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCR9	P51686	369 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	CLCNKB	P51801	687 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	HMGCS2	P54868	508 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	BACE1	P56817	501 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	UFM1	P61960	85 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	HTD2	P86397	168 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	CFHR1	Q03591	330 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	GBE1	Q04446	702 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SPP2	Q13103	211 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	RUNX2	Q13950	521 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	COG2	Q14746	738 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	VEPH1	Q14D04	833 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ADIPOQ	Q15848	244 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	C2orf76	Q3KRA6	126 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	KBTBD12	Q3ZCT8	623 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	FBXO43	Q4G163	708 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	MIDN	Q504T8	468 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF766	Q5HY98	468 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	MTX3	Q5HYI7	312 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ENTPD8	Q5MY95	495 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	C6orf10	Q5SRN2	563 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	UBAP2	Q5T6F2	1119 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	VWA5B1	Q5TIE3	1220 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	C12orf60	Q5U649	245 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	NAPEPLD	Q6IQ20	393 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	GBP6	Q6ZN66	633 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLFN11	Q7Z7L1	901 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	NEK8	Q86SG6	692 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	WDR5B	Q86VZ2	330 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	LRRC49	Q8IUZ0	686 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	CEP97	Q8IW35	865 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCDC13	Q8IYE1	715 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	DCLK2	Q8N568	766 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	LRRC57	Q8N9N7	239 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC44A5	Q8NCS7	719 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ETNPPL	Q8TBG4	499 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	GDPD5	Q8WTR4	605 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SHC3	Q92529	594 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	EXOC4	Q96A65	974 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ELP4	Q96EB1	424 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SAAL1	Q96ER3	474 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	DYNLL2	Q96FJ2	89 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ERO1A	Q96HE7	468 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PPP1R13B	Q96KQ4	1090 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	FRG2B	Q96QU4	278 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PARK7	Q99497	189 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZPBP	Q9BS86	351 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRSS22	Q9GZN4	317 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	IQCG	Q9H095	443 aa	Known RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	C1orf21	Q9H246	121 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	TASP1	Q9H6P5	420 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	KRT84	Q9NSB2	600 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PSD3	Q9NYI0	1048 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	HCN3	Q9P1Z3	774 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	NLK	Q9UBE8	527 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	MORF4L1	Q9UBU8	362 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMED5	Q9Y3A6	229 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	JRKL	Q9Y4A0	524 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	AK9	Q5TCS8	1911 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	PLXNB2	O15031	1838 aa		4.14	□□□□□ -1.75
LRRC28-222	ENST00000561431	MGAM	O43451	1857 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIR2DS5	A0A0G2JLQ3	304 aa		4.13	□□□□□ -1.75

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