RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PTSQ03393 145 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 BST1Q10588 318 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 GRSF1Q12849 480 aaKnown RBP eCLIP7.44□□□□□ -1.22
TPM1-231ENST00000561395 STX3Q13277 289 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ARHGEF7Q14155 803 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ITIH4Q14624 930 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 CHRNA6Q15825 494 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 POM121L1PQ3SYA9 428 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 GPR33Q49SQ1 333 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SETMARQ53H47 684 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 TECRLQ5HYJ1 363 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 CTSL3PQ5NE16 218 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 AGAP9Q5VTM2 703 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ZDHHC20Q5W0Z9 365 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 EGFLAMQ63HQ2 1017 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ERAP2Q6P179 960 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 KLC3Q6P597 504 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TMEM207Q6UWW9 146 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SERPINA13PQ6UXR4 307 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ZYG11AQ6WRX3 759 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 NUDT18Q6ZVK8 323 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TAS2R42Q7RTR8 314 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SERPINA9Q86WD7 417 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SPATS2Q86XZ4 545 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 C10orf107Q8IVU9 208 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SPNS2Q8IVW8 549 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 NXPE1Q8N323 547 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 FSTL5Q8N475 847 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 SPATA6LQ8N4H0 392 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TMEM151AQ8N4L1 468 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ANKS4BQ8N8V4 417 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 GPR26Q8NDV2 337 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 OR6Y1Q8NGX8 325 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 PPP1R14CQ8TAE6 165 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 PIP4K2CQ8TBX8 421 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 HEXDCQ8WVB3 486 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ANKRD49Q8WVL7 239 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SREK1Q8WXA9 508 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 ARRDC3Q96B67 414 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SCYL1Q96KG9 808 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 C7orf26Q96N11 449 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 FAM129BQ96TA1 746 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TTC1Q99614 292 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 MRPL57Q9BQC6 102 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 P2RY12Q9H244 342 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 CCDC68Q9H2F9 335 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 MRPL46Q9H2W6 279 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 SLC32A1Q9H598 525 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ASB8Q9H765 288 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TAS2R13Q9NYV9 303 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 PKD2L2Q9NZM6 624 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 NFKBIL1Q9UBC1 381 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 XPR1Q9UBH6 696 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SARDHQ9UL12 918 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 PPM1HQ9ULR3 514 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 RUVBL2Q9Y230 463 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 OAS3Q9Y6K5 1087 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 GOLGA4Q13439 2230 aaKnown RBP7.43□□□□□ -1.22
TPM1-231ENST00000561395 CFAP46Q8IYW2 2715 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 RGSL1A5PLK6 1076 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 PATE3B3GLJ2 98 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 PSMD11O00231 422 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 PRMT5O14744 637 aaPredicted RBP7.43□□□□□ -1.22
TPM1-231ENST00000561395 NPC1O15118 1278 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 SPINT1O43278 529 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 NIPSNAP2O75323 286 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 VPS26AO75436 327 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 TGDSO95455 350 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 PYGLP06737 847 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 RBP1P09455 135 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 TROVE2P10155 538 aaKnown RBP eCLIP7.43□□□□□ -1.22
TPM1-231ENST00000561395 RALBP11234 206 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ZNF7P17097 686 aaPredicted RBP7.43□□□□□ -1.22
TPM1-231ENST00000561395 GRK2P25098 689 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 TNFRSF4P43489 277 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 METAP1P53582 386 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 PRKAA2P54646 552 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 SIM1P81133 766 aaPredicted RBP7.43□□□□□ -1.22
TPM1-231ENST00000561395 C19orf57Q0VDD7 668 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 SF3A3Q12874 501 aaKnown RBP eCLIP7.43□□□□□ -1.229e-9■■■■□ 23.4
TPM1-231ENST00000561395 RALGDSQ12967 914 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ITGA9Q13797 1035 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ENPP2Q13822 863 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 CSHL1Q14406 222 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ACAP2Q15057 778 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 E2F5Q15329 346 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ATP13A5Q4VNC0 1218 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 LIPMQ5VYY2 423 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 DMRTA1Q5VZB9 504 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ZCCHC23Q6ZST2 131 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 RFLNAQ6ZTI6 216 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 HSD11B1LQ7Z5J1 315 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 DSG4Q86SJ6 1040 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 TTC7BQ86TV6 843 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 CHCHD4Q8N4Q1 142 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 GIMAP7Q8NHV1 300 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 ZNF398Q8TD17 642 aa7.43□□□□□ -1.22
TPM1-231ENST00000561395 DTX3LQ8TDB6 740 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms