RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 DYRK3O43781 588 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 ZNF286BP0CG31 522 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 IGFBP6P24592 240 aaPredicted RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 ARL1P40616 181 aaPredicted RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 NFKB2Q00653 900 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 CDC20Q12834 499 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 SMUG1Q53HV7 270 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 ELMO1Q92556 727 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 LGALS12Q96DT0 336 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 YIPF6Q96EC8 236 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 SLC47A1Q96FL8 570 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 RBM4BQ9BQ04 359 aaKnown RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 RBM4Q9BWF3 364 aaKnown RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 SP140LQ9H930 580 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 ADGRE2Q9UHX3 823 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 TESMINQ9Y4I5 508 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 PCDHGA10Q9Y5H3 936 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 CSADQ9Y600 493 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 SOCS7O14512 581 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ENPP3O14638 875 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 MAFKO60675 156 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 CCNCP24863 283 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 CD6P30203 668 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 MASP1P48740 699 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 LCP2Q13094 533 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 CLCA4Q14CN2 919 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ZNF691Q5VV52 312 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 SPATA19Q7Z5L4 167 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 GALNT13Q8IUC8 556 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ARHGAP12Q8IWW6 846 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 SYTL1Q8IYJ3 562 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ATL1Q8WXF7 558 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ZHX1-C8orf76Q96EF9 292 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 CLSTN3Q9BQT9 956 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ACTR8Q9H981 624 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 TBC1D14Q9P2M4 693 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 CAB39Q9Y376 341 aaPredicted RBP16.3■□□□□ 0.2
TPM1-228ENST00000560975 IDH3BO43837 385 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 USP2O75604 605 aaPredicted RBP16.3■□□□□ 0.2
TPM1-228ENST00000560975 CCNKO75909 580 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 MT-ND2P03891 347 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 PFKLP17858 780 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 AGTR2P50052 363 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 AIF1P55008 147 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ARPC4P59998 168 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 VARS2Q5ST30 1063 aaKnown RBP16.3■□□□□ 0.2
TPM1-228ENST00000560975 TMC5Q6UXY8 1006 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 ARMCX2Q7L311 632 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 PROKR1Q8TCW9 393 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 NAALAD2Q9Y3Q0 740 aa16.3■□□□□ 0.2
TPM1-228ENST00000560975 MFN2O95140 757 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 GGT1P19440 569 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 PHC1P78364 1004 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 SMN1Q16637 294 aaKnown RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 LAIR1Q6GTX8 287 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 ZNF549Q6P9A3 640 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 DLEU7Q6UYE1 221 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 B3GNT8Q7Z7M8 397 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 FBXO39Q8N4B4 442 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 ISG20Q96AZ6 181 aaKnown RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 UGT2B28Q9BY64 529 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 FAM49AQ9H0Q0 323 aaPredicted RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 MOV10Q9HCE1 1003 aaKnown RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 TRPV5Q9NQA5 729 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 CACNG4Q9UBN1 327 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 C3orf18Q9UK00 162 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 DNAJB5O75953 348 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 PRKD3O94806 890 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 SLC26A2P50443 739 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 SERPINH1P50454 418 aaKnown RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 ST13P50502 369 aaKnown RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 SOX4Q06945 474 aaPredicted RBP16.29■□□□□ 0.2
TPM1-228ENST00000560975 EPS8Q12929 822 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 ACOX1Q15067 660 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 RBBP7Q16576 425 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 DCAF15Q66K64 600 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 SYVN1Q86TM6 617 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 LRRC49Q8IUZ0 686 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 ELMOD1Q8N336 334 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 PJA1Q8NG27 643 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 OR10A6Q8NH74 314 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 TSPEARQ8WU66 669 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 RDH12Q96NR8 316 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 RIBC2Q9H4K1 309 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 TMEM30AQ9NV96 361 aa16.29■□□□□ 0.2
TPM1-228ENST00000560975 FAM234BA2RU67 622 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 PIRO00625 290 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 MATN3O15232 486 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
TPM1-228ENST00000560975 KRT8P05787 483 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 ALOX12P18054 663 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 TAF6P49848 677 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 SYT16Q17RD7 645 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 KIAA0319Q5VV43 1072 aa16.28■□□□□ 0.2
TPM1-228ENST00000560975 WSCD1Q658N2 575 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms