RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MGAT5Q09328 741 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 PDE1CQ14123 709 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 ZNF460Q14592 562 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 GRM3Q14832 879 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 WSCD2Q2TBF2 565 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 ZNF284Q2VY69 593 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TTC31Q49AM3 519 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 TMEM52BQ4KMG9 183 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 ATP13A5Q4VNC0 1218 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TTMPQ5BVD1 217 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CEP85LQ5SZL2 805 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TPRG1LQ5T0D9 272 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 RBM20Q5T481 1227 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 HENMT1Q5T8I9 393 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 TEDDM1Q5T9Z0 273 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3GQ6DHY5 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 RAET1GQ6H3X3 334 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3CQ6IPX1 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CNSTQ6PJW8 725 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 DOK6Q6PKX4 331 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 AFTPHQ6ULP2 937 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 PACS1Q6VY07 963 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 NAPRTQ6XQN6 538 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 DET1Q7L5Y6 550 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TAS2R42Q7RTR8 314 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TECPR1Q7Z6L1 1165 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CMC1Q7Z7K0 106 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 PIM3Q86V86 326 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 RELL1Q8IUW5 271 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 SLC41A1Q8IVJ1 513 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3Q8IZP1 549 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 NETO1Q8TDF5 533 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 GPBAR1Q8TDU6 330 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 STYXQ8WUJ0 223 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 SNX19Q92543 992 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 FAM131CQ96AQ9 280 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 LRRC39Q96DD0 335 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 DTD2Q96FN9 168 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TOE1Q96GM8 510 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 CDKN2AIPNLQ96HQ2 116 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 FRMD6Q96NE9 622 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TTC25Q96NG3 672 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 LENG8Q96PV6 779 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 KLF6Q99612 283 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 SPATA16Q9BXB7 569 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 GPR174Q9BXC1 333 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 FRMD8Q9BZ67 464 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 UNKQ9C0B0 810 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 CENPHQ9H3R5 247 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CAB39LQ9H9S4 337 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 PRMT8Q9NR22 394 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 GALPQ9UBC7 116 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 FAM8A1Q9UBU6 413 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 RPL26L1Q9UNX3 145 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 PKP3Q9Y446 797 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 OR1A2Q9Y585 309 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 NCOR1O75376 2440 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CACNA1IQ9P0X4 2223 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 UBA6A0AVT1 1052 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 H3BQF6 201 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 MAP2K7O14733 419 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CD3EAPO15446 510 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 AP1G1O43747 822 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 DNAJC6O75061 913 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ATG13O75143 517 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 FBXO24O75426 580 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 SRP72O76094 671 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 ALDH1A2O94788 518 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 HAUS5O94927 633 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 PAPSS2O95340 614 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 SEMA4FO95754 770 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 PAK4O96013 591 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 IGHV4-34P06331 123 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ABHD2P08910 425 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 NUDT17P0C025 328 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CREB1P16220 341 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ZNF30P17039 623 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CD6P30203 668 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 CXCL12P48061 93 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 EIF3BP55884 814 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 B4GALNT1Q00973 533 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 IRF9Q00978 393 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 IFFO1Q0D2I5 559 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ELP6Q0PNE2 266 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 NFATC2Q13469 925 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 THOC5Q13769 683 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 PLCL1Q15111 1095 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 KRT71Q3SY84 523 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 HSF5Q4G112 596 aaPredicted RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 CTSL3PQ5NE16 218 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 GPRC6AQ5T6X5 926 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 MROH9Q5TGP6 573 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 PDPK2PQ6A1A2 396 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 NEPROQ6NW34 567 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 ZNF549Q6P9A3 640 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 GCNT7Q6ZNI0 430 aa5.16□□□□□ -1.58
SPG11-220ENST00000559933 MARK2Q7KZI7 788 aaKnown RBP5.16□□□□□ -1.58
SPG11-220ENST00000559933 HDXQ7Z353 690 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms