RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 EPB41L1Q9H4G0 881 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 ZNF624Q9P2J8 865 aaPredicted RBP12.37□□□□□ -0.43
LRRC28-214ENST00000559433 CACNA1GO43497 2377 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 LILRA5A6NI73 299 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 OR52A4PA6NMU1 304 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 ERI2A8K979 691 aaKnown RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 E7EVH7 732 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 KCNJ13O60928 360 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 POP7O75817 140 aaKnown RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 CCL4P13236 92 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 BRAFP15056 766 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 MC4RP32245 332 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 FDFT1P37268 417 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 SLC19A1P41440 591 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 HALP42357 657 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 DMPKQ09013 629 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 WDR74Q6RFH5 385 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 ABRAXAS1Q6UWZ7 409 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 WASH2PQ6VEQ5 465 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 PPP1R21Q6ZMI0 780 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 TMEM26Q6ZUK4 368 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 SNX20Q7Z614 316 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 LINC00523Q86TU6 105 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 BEND7Q8N7W2 519 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 CCDC89Q8N998 374 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 NAT14Q8WUY8 206 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 CCNL2Q96S94 520 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 FAM96AQ9H5X1 160 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 UCK1Q9HA47 277 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 ETNK1Q9HBU6 452 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 CPNE5Q9HCH3 593 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 POT1Q9NUX5 634 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 FAM8A1Q9UBU6 413 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 DNMT3AQ9Y6K1 912 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-214ENST00000559433 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 PIKFYVEQ9Y2I7 2098 aa12.36□□□□□ -0.43
LRRC28-214ENST00000559433 CCDC78A2IDD5 438 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 A8MU76 341 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 CFAP99D6REC4 459 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 CEP104O60308 925 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 UBXN7O94888 489 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 GAS8O95995 478 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 FGGP02679 453 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 RALBP11234 206 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 ETS1P14921 441 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 AMD1P17707 334 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 CLN3Q13286 438 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 NFE2L1Q14494 772 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 CLCA4Q14CN2 919 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 SIX1Q15475 284 aaPredicted RBP12.35□□□□□ -0.43
LRRC28-214ENST00000559433 BCL7AQ4VC05 210 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 SOWAHCQ53LP3 525 aaPredicted RBP12.35□□□□□ -0.43
LRRC28-214ENST00000559433 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 FAM83HQ6ZRV2 1179 aaPredicted RBP12.35□□□□□ -0.43
LRRC28-214ENST00000559433 PRUNE1Q86TP1 453 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 FAM129CQ86XR2 697 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 NXPE1Q8N323 547 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 DNAAF3Q8N9W5 541 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 ZSCAN1Q8NBB4 408 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 OR52K1Q8NGK4 314 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 MAIP1Q8WWC4 291 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 TAAR9Q96RI9 348 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 COPS8Q99627 209 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 TLR10Q9BXR5 811 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 NLE1Q9NVX2 485 aaPredicted RBP12.35□□□□□ -0.43
LRRC28-214ENST00000559433 SLC39A1Q9NY26 324 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 KLHL3Q9UH77 587 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 PSMD13Q9UNM6 376 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
LRRC28-214ENST00000559433 GOLGA6L3A6NEY3 463 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 AGAP14A8MT82 685 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 C9orf172C9J069 976 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 H7C0S8 307 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 SUN1O94901 812 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-214ENST00000559433 TYRP1P17643 537 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 ACRV1P26436 265 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 CD82P27701 267 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 CXCR5P32302 372 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 CDKN1CP49918 316 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-214ENST00000559433 RHDQ02161 417 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 CDH17Q12864 832 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 SEMA5AQ13591 1074 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 GPR18Q14330 331 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 RPE65Q16518 533 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 CCNG2Q16589 344 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 GPR33Q49SQ1 333 aa12.34□□□□□ -0.43
LRRC28-214ENST00000559433 CCDC38Q502W7 563 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms