RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 MSH3P20585 1137 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 FECHP22830 423 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 DLSTP36957 453 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 CETN2P41208 172 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ARL4DP49703 201 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 COPS2P61201 443 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 NFKB2Q00653 900 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 DMPKQ09013 629 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 LLGL1Q15334 1064 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 CHRNA6Q15825 494 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 DEFB109BQ30KR1 87 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 KHDC1Q4VXA5 237 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 FAM182AQ5T1J6 154 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ITPRIPL1Q6GPH6 555 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 TMEM220Q6QAJ8 160 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 FAM151BQ6UXP7 276 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 C11orf96Q7Z7L8 435 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 PPP1R3BQ86XI6 285 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 CCDC170Q8IYT3 715 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF567Q8N184 647 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 RASGEF1AQ8N9B8 481 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 DDHD1Q8NEL9 900 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 C9orf43Q8TAL5 461 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF398Q8TD17 642 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ZFPM2Q8WW38 1151 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 UBXN4Q92575 508 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 MRGPRX2Q96LB1 330 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 FCRL4Q96PJ5 515 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 PPP1R2P1Q96PQ5 205 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ANAPC2Q9UJX6 822 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 TMPRSS11EQ9UL52 423 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 ACSL5Q9ULC5 683 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 AAR2Q9Y312 384 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 hCG_1818297A0A087WSY0 165 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 C5orf60A6NFR6 353 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 H7C0C1 242 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A9O60656 530 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF189O75820 626 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 NDUFA10O95299 355 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 IPO7O95373 1038 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 RALBP11234 206 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 FGF5P12034 268 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 NELFEP18615 380 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A6P19224 532 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 LPOP22079 712 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A1P22309 533 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A4P22310 534 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 CTNNA2P26232 953 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 AKT1P31749 480 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 ATP5OP48047 213 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 LEPRP48357 1165 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 GEMP55040 296 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 PDE1BQ01064 536 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 TBX2Q13207 712 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 PLCL1Q15111 1095 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 METRNLQ641Q3 311 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 ARMC6Q6NXE6 501 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 C16orf46Q6P387 395 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 FAM92BQ6ZTR7 304 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 DAAM2Q86T65 1068 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 PTRH1Q86Y79 214 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 SIDT2Q8NBJ9 832 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 OXNAD1Q96HP4 312 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 QKIQ96PU8 341 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 TRIM5Q9C035 493 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 TRIM4Q9C037 500 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A7Q9HAW7 530 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A10Q9HAW8 530 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 UGT1A8Q9HAW9 530 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 LNPEPQ9UIQ6 1025 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 EFR3BQ9Y2G0 817 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 PCDHA13Q9Y5I0 950 aa13.34□□□□□ -0.27
SNRPA1-204ENST00000558020 APOC4-APOC2K7ER74 178 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 KATNA1O75449 491 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 SPAG6O75602 509 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 KIAA0754O94854 1291 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 LCA5LO95447 670 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 RECKO95980 971 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 APOC2P02655 101 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 CYLC1P35663 651 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 CHRNA4P43681 627 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 SH3BP2P78314 561 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 ACY1Q03154 408 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 TLE1Q04724 770 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 KRT33BQ14525 404 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 RPE65Q16518 533 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 FNBP1LQ5T0N5 605 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 GPRC6AQ5T6X5 926 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 C11orf63Q6NUN7 778 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 BBS12Q6ZW61 710 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 KMT5CQ86Y97 462 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 GALNT6Q8NCL4 622 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 RSC1A1Q92681 617 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms