RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 KCNJ11Q14654 390 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PPP1R7Q15435 360 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 FNBP1LQ5T0N5 605 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 AGAP9Q5VTM2 703 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 ABRAXAS1Q6UWZ7 409 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 DET1Q7L5Y6 550 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 SERPINA9Q86WD7 417 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 CREG2Q8IUH2 290 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 KDF1Q8NAX2 398 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 MCUQ8NE86 351 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 OR13J1Q8NGT2 312 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 HDAC10Q969S8 669 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 SGF29Q96ES7 293 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 SGSM3Q96HU1 749 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 LINC00615Q96LM1 132 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 DPYSL5Q9BPU6 564 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 CCDC86Q9H6F5 360 aaKnown RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 VPS37BQ9H9H4 285 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 MRM3Q9HC36 420 aaKnown RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PRDM8Q9NQV8 689 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 DKK4Q9UBT3 224 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PCYOX1Q9UHG3 505 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 NEU2Q9Y3R4 380 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 IGLV3-16A0A075B6K0 115 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 TCRBV7S3A2A0A539 114 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 MGAT4DA6NG13 374 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 PRR19A6NJB7 356 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 D6RAR5 112 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 F8W8V4 182 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CCDC188H7C350 402 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 QSOX1O00391 747 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 B4GAT1O43505 415 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 AP2A2O94973 939 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CPNE6O95741 557 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 GOT2P00505 430 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 VIPP01282 170 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 GSTM1P09488 218 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 MLNP12872 115 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CASQ1P31415 396 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 FOXN2P32314 431 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 NSG1P42857 185 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 PRLHRP49683 370 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CDKN1CP49918 316 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 ARSDP51689 593 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 INHBCP55103 352 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 OR1D5P58170 312 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 GSTM4Q03013 218 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 RTP5Q14D33 572 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 SEPT7Q16181 437 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 MAP9Q49MG5 647 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 FASTKD1Q53R41 847 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CERS6Q6ZMG9 384 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 SYDE1Q6ZW31 735 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 PCGF5Q86SE9 256 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 PIM3Q86V86 326 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 TRIM48Q8IWZ4 208 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 BEND7Q8N7W2 519 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 OR6P1Q8NGX9 317 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 OR2L2Q8NH16 312 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 OR4L1Q8NH43 312 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 OR10G6Q8NH81 332 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 ZCCHC14Q8WYQ9 949 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CPT1BQ92523 772 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 SLCO2A1Q92959 643 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 AHCYL2Q96HN2 611 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 STRADBQ9C0K7 418 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 DDX47Q9H0S4 455 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 UCK1Q9HA47 277 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 XAB2Q9HCS7 855 aaKnown RBP12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CHRAC1Q9NRG0 131 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 POT1Q9NUX5 634 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 KCNK4Q9NYG8 393 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 CPNE7Q9UBL6 633 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 ACSL5Q9ULC5 683 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 ENTPD2Q9Y5L3 495 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 AK5Q9Y6K8 562 aa12.27□□□□□ -0.45
SLIRP-211ENST00000557623 C17orf113A0A1B0GUU1 675 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 DUX1O43812 170 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 MGAT1P26572 445 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 RPL10P27635 214 aaKnown RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 PBLDP30039 288 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 CCKBRP32239 447 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 TERF1P54274 439 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 EPHA4P54764 986 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 UBE2IP63279 158 aaKnown RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 EIF3IQ13347 325 aaKnown RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 DBN1Q16643 649 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 AMZ1Q400G9 498 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 AARS2Q5JTZ9 985 aaKnown RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 METRNLQ641Q3 311 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF449Q6P9G9 518 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 PACS1Q6VY07 963 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF534Q76KX8 674 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms