RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MAP7Q14244 749 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 CLCA4Q14CN2 919 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 GPRC6AQ5T6X5 926 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 CYB5D1Q6P9G0 228 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 TIPARPQ7Z3E1 657 aaKnown RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 PRSS42Q7Z5A4 293 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 CDKL3Q8IVW4 592 aaPredicted RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 ESX1Q8N693 406 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 GPR150Q8NGU9 434 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 ACTL9Q8TC94 416 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 ZDHHC12Q96GR4 267 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 ZNF514Q96K75 400 aaPredicted RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 PANX2Q96RD6 677 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 FICDQ9BVA6 458 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 ULBP3Q9BZM4 244 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 EFR3BQ9Y2G0 817 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 WDR37Q9Y2I8 494 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 LOC101059948A0A1B0GTJ6 334 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 OR2AG2A6NM03 316 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 C2orf81A6NN90 581 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A9O60656 530 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
SNX6-210ENST00000557341 NDUFA10O95299 355 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A6P19224 532 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 MSH3P20585 1137 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A1P22309 533 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A4P22310 534 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 FECHP22830 423 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 PBLDP30039 288 aaPredicted RBP13.89□□□□□ -0.19
SNX6-210ENST00000557341 PTPN7P35236 360 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 STAT5AP42229 794 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 SEPHS1P49903 392 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 POLE2P56282 527 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 CDC20Q12834 499 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 NFE2L1Q14494 772 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 IL11RAQ14626 422 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 PLCL1Q15111 1095 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 TAF1AQ15573 450 aaPredicted RBP13.89□□□□□ -0.19
SNX6-210ENST00000557341 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 IRGCQ6NXR0 463 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UNC5BQ8IZJ1 945 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 STARD8Q92502 1023 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 PPP1R2P1Q96PQ5 205 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 GORASP1Q9BQQ3 440 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 OSBPL8Q9BZF1 889 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 RAB33BQ9H082 229 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 SLC25A18Q9H1K4 315 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 C10orf88Q9H8K7 445 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A7Q9HAW7 530 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A10Q9HAW8 530 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 UGT1A8Q9HAW9 530 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 EPHA6Q9UF33 1036 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 AAR2Q9Y312 384 aaKnown RBP13.89□□□□□ -0.19
SNX6-210ENST00000557341 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
SNX6-210ENST00000557341 DNMT3AQ9Y6K1 912 aaPredicted RBP13.89□□□□□ -0.19
SNX6-210ENST00000557341 KLHL33A6NCF5 533 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 C5orf60A6NFR6 353 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 KCNN4O15554 427 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 POP7O75817 140 aaKnown RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 AGTP01019 485 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 PRKAR1AP10644 381 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 RBP3P10745 1247 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 LPOP22079 712 aaPredicted RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 PSMB4P28070 264 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 CA5AP35218 305 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 CETN2P41208 172 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 CCR10P46092 362 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 NAP1L1P55209 391 aaKnown RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 EIF3EP60228 445 aaKnown RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 SH3BP2P78314 561 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 NFKB2Q00653 900 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 MC1RQ01726 317 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 KCNAB2Q13303 367 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 PRPSAP1Q14558 356 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 CACHD1Q5VU97 1274 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 KLHL35Q6PF15 583 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 TMEM220Q6QAJ8 160 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 FAM83HQ6ZRV2 1179 aaPredicted RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 FAM92BQ6ZTR7 304 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 RASGRP3Q8IV61 690 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 ZNF398Q8TD17 642 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 MRFAP1L1Q96HT8 127 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 IMP3Q9NV31 184 aaKnown RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 TUBD1Q9UJT1 453 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 PSMD13Q9UNM6 376 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
SNX6-210ENST00000557341 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
SNX6-210ENST00000557341 RCCD1A6NED2 376 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 BTNL10A8MVZ5 291 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms