RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TSGA13Q96PP4 275 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TUBB2BQ9BVA1 445 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 CHST8Q9H2A9 424 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 HSD3B7Q9H2F3 369 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 G3BP2Q9UN86 482 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 SNX7Q9UNH6 387 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 PCDHGB7Q9Y5F8 929 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 C2CD3Q4AC94 2353 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 SSU72P8A0A1W2PR75 194 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 UBA6A0AVT1 1052 aaPredicted RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 TLCD2A6NGC4 264 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 KCNK1O00180 336 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 VEGFDO43915 354 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 CBX6O95503 412 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 JCHAINP01591 159 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 KLK3P07288 261 aaPredicted RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 SKILP12757 684 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 BPIP17213 487 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 VCLP18206 1134 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 VARSP26640 1264 aaKnown RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 TNFRSF8P28908 595 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 GJC1P36383 396 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 HALP42357 657 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 ARSEP51690 589 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ITGA1P56199 1179 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 GBE1Q04446 702 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 RAPSNQ13702 412 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 DPYSL3Q14195 570 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 PLCL1Q15111 1095 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 GPR19Q15760 415 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ATP13A4Q4VNC1 1196 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 PRAMEF17Q5VTA0 474 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 PDPK2PQ6A1A2 396 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 LCN10Q6JVE6 187 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 KLHL35Q6PF15 583 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 TMC3Q7Z5M5 1100 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 C11orf96Q7Z7L8 435 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 KMT5CQ86Y97 462 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 SRRM1Q8IYB3 904 aaKnown RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 D2HGDHQ8N465 521 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 CNTD1Q8N815 330 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ENDOVQ8N8Q3 282 aaKnown RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 NIPA2Q8N8Q9 360 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 CCNYQ8ND76 341 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 FAM71BQ8TC56 605 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 SNRNP40Q96DI7 357 aaKnown RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 C5orf34Q96MH7 638 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 TRIB3Q96RU7 358 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ISCUQ9H1K1 167 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ASF1BQ9NVP2 202 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 GPR83Q9NYM4 423 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 AIPL1Q9NZN9 384 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 NFKBIL1Q9UBC1 381 aaPredicted RBP8.83□□□□□ -1
HNRNPC-227ENST00000556897 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ANAPC7Q9UJX3 599 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 TCFL5Q9UL49 500 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 TMPRSS11EQ9UL52 423 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 PSMD13Q9UNM6 376 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 ZNF711Q9Y462 761 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 POLQO75417 2590 aa8.83□□□□□ -1
HNRNPC-227ENST00000556897 OR5K3A6NET4 321 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 MEN1O00255 615 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 AURKAO14965 403 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 DDX3YO15523 660 aaKnown RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 MX2P20592 715 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 PRKCIP41743 596 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 KLHL30Q0D2K2 578 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 TMEM115Q12893 351 aaPredicted RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 SLC10A2Q12908 348 aaPredicted RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 ZBTB17Q13105 803 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 RPE65Q16518 533 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 PCSK7Q16549 785 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 PLEKHN1Q494U1 663 aaPredicted RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 ATP13A5Q4VNC0 1218 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 ZRANB3Q5FWF4 1079 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 PLEKHS1Q5SXH7 462 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 CCDC183Q5T5S1 534 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 C1QL3Q5VWW1 255 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 AMZ2Q86W34 360 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 HPS6Q86YV9 775 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 IQCKQ8N0W5 287 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 CISD2Q8N5K1 135 aaKnown RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 PQLC3Q8N755 202 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 TMEM102Q8N9M5 508 aaPredicted RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 KCTD6Q8NC69 237 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 GDAP1Q8TB36 358 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 ZNF501Q96CX3 271 aaPredicted RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 HDAC11Q96DB2 347 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 PPM1MQ96MI6 270 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 LRFN5Q96NI6 719 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 CD180Q99467 661 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 SMAD5Q99717 465 aaKnown RBP8.82□□□□□ -1
HNRNPC-227ENST00000556897 NLNQ9BYT8 704 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 CEP41Q9BYV8 373 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 GPR63Q9BZJ6 419 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 THAP2Q9H0W7 228 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 MAGEE1Q9HCI5 957 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 BPIFA1Q9NP55 256 aa8.82□□□□□ -1
HNRNPC-227ENST00000556897 RAD18Q9NS91 495 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms