RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 FAM83HQ6ZRV2 1179 aaPredicted RBP22.45■■□□□ 1.18
TDP1-216ENST00000556867 PROSER1Q86XN7 944 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 CREG2Q8IUH2 290 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 NAT14Q8WUY8 206 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 CPT1BQ92523 772 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 SGSM3Q96HU1 749 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 SLC38A3Q99624 504 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 ZMIZ1Q9ULJ6 1067 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 AK5Q9Y6K8 562 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 A0A1W2PNU3 283 aaPredicted RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 OR51F1A6NGY5 319 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 FANCGO15287 622 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 GOT2P00505 430 aaKnown RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 PBLDP30039 288 aaPredicted RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 SLC19A1P41440 591 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 LSSP48449 732 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 EPHA4P54764 986 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 DRG2P55039 364 aaKnown RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 SARNPP82979 210 aaKnown RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 ZFP36L1Q07352 338 aaKnown RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 NFE2L1Q14494 772 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 ITIH4Q14624 930 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 TMPRSS9Q7Z410 1059 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 PIM3Q86V86 326 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 ZNF761Q86XN6 746 aaPredicted RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 SLITRK4Q8IW52 837 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 OR2L2Q8NH16 312 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 SLCO2A1Q92959 643 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.44■■□□□ 1.18
TDP1-216ENST00000556867 CAPZA3Q96KX2 299 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 FOXP3Q9BZS1 431 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 DDX47Q9H0S4 455 aaKnown RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 POLR1BQ9H9Y6 1135 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 UCK1Q9HA47 277 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 MRM3Q9HC36 420 aaKnown RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 CHRAC1Q9NRG0 131 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 POT1Q9NUX5 634 aa22.44■■□□□ 1.18
TDP1-216ENST00000556867 ZNF624Q9P2J8 865 aaPredicted RBP22.44■■□□□ 1.18
TDP1-216ENST00000556867 CCDC187A0A096LP49 1063 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 LILRA5A6NI73 299 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 TMEM63AO94886 807 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 MPOP05164 745 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 GABREP78334 506 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 PRAMEP78395 509 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 CRADDP78560 199 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 ANKRD22Q5VYY1 191 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 ARMC3Q5W041 872 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 METRNLQ641Q3 311 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 PACS1Q6VY07 963 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 TRIM48Q8IWZ4 208 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 DPYSL5Q9BPU6 564 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 NUDT22Q9BRQ3 303 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 STRADBQ9C0K7 418 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 RDH14Q9HBH5 336 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 TREX1Q9NSU2 369 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 PCYOX1Q9UHG3 505 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 SATB2Q9UPW6 733 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 WDR37Q9Y2I8 494 aa22.43■■□□□ 1.18
TDP1-216ENST00000556867 TAF4O00268 1085 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 BRINP1O60477 761 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 DXOO77932 396 aaKnown RBP22.42■■□□□ 1.18
TDP1-216ENST00000556867 VIPP01282 170 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 MGAT1P26572 445 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 CSF2RBP32927 897 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 HALP42357 657 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 TERF1P54274 439 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 EIF3IQ13347 325 aaKnown RBP22.42■■□□□ 1.18
TDP1-216ENST00000556867 CLCA4Q14CN2 919 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 C3orf38Q5JPI3 329 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 LYPLAL1Q5VWZ2 237 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 IGF2-ASQ6U949 168 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 XKR5Q6UX68 686 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 USP53Q70EK8 1073 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 MCUQ8NE86 351 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 OR6P1Q8NGX9 317 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 OR4L1Q8NH43 312 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 OR10G6Q8NH81 332 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 WDR36Q8NI36 951 aaKnown RBP22.42■■□□□ 1.18
TDP1-216ENST00000556867 HM13Q8TCT9 377 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 KIFC1Q9BW19 673 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 EPB41L5Q9HCM4 733 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 SYBUQ9NX95 663 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 PCDHGA8Q9Y5G5 932 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 CACNA1BQ00975 2339 aa22.42■■□□□ 1.18
TDP1-216ENST00000556867 C17orf113A0A1B0GUU1 675 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 OR52A4PA6NMU1 304 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 DUX1O43812 170 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 AP2A2O94973 939 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 MLNP12872 115 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 NSG1P42857 185 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 PPP1R7Q15435 360 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 NKAIN2Q5VXU1 208 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 CERS6Q6ZMG9 384 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 TMEM26Q6ZUK4 368 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 CAND1Q86VP6 1230 aaKnown RBP22.41■■□□□ 1.18
TDP1-216ENST00000556867 RBM12BQ8IXT5 1001 aaKnown RBP22.41■■□□□ 1.18
TDP1-216ENST00000556867 LSMEM2Q8N112 164 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 C17orf53Q8N3J3 647 aaPredicted RBP22.41■■□□□ 1.18
TDP1-216ENST00000556867 SEMA6CQ9H3T2 930 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms