RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 RHDQ02161 417 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ADCY2Q08462 1091 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 TMEM115Q12893 351 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 NOMO1Q15155 1222 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 LONRF2Q1L5Z9 754 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 NKAIN2Q5VXU1 208 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 WDR74Q6RFH5 385 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 LIAT1Q6ZQX7 453 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 FAM129CQ86XR2 697 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 SLITRK4Q8IW52 837 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 SFTPA2Q8IWL1 248 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 RBM12BQ8IXT5 1001 aaKnown RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 SPC24Q8NBT2 197 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 DTX3LQ8TDB6 740 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 NCSTNQ92542 709 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 EID2BQ96D98 161 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF514Q96K75 400 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 WDR24Q96S15 920 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 TSGA10Q9BZW7 698 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 GBA3Q9H227 469 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 SEMA6CQ9H3T2 930 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ARFGAP3Q9NP61 516 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 IL26Q9NPH9 171 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ZDHHC3Q9NYG2 299 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CPNE7Q9UBL6 633 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 DNAJC16Q9Y2G8 782 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 KCNMB2Q9Y691 235 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 IGHV5-10-1A0A0J9YXX1 117 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 KLHL33A6NCF5 533 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 F5H423 210 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 STMND1H3BQB6 276 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 AURKAO14965 403 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CHUKO15111 745 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CASC3O15234 703 aaKnown RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 PJA2O43164 708 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 KRT86O43790 486 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 GAS8O95995 478 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 LIPCP11150 499 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF7P17097 686 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 AMD1P17707 334 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 MSH3P20585 1137 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 LPOP22079 712 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CDC25BP30305 580 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 AKT1P31749 480 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 HADHAP40939 763 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 MAPK9P45984 424 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 GSDMDP57764 484 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ATP13A5Q4VNC0 1218 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ANKRD20A2Q5SQ80 823 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 SNAP47Q5SQN1 464 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 MANEAQ5SRI9 462 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 DCAF12Q5T6F0 453 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ANKRD20A1Q5TYW2 823 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ANKRD20A3Q5VUR7 823 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 KLHL35Q6PF15 583 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CRTC3Q6UUV7 619 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 KDELC1Q6UW63 502 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 RAD9BQ6WBX8 426 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ARHGEF18Q6ZSZ5 1173 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ADGRG6Q86SQ4 1221 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 AMZ2Q86W34 360 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 RNF10Q8N5U6 811 aaKnown RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 RCBTB1Q8NDN9 531 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ACRBPQ8NEB7 543 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF398Q8TD17 642 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 USP7Q93009 1102 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CXorf40BQ96DE9 158 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 DCUN1D1Q96GG9 259 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 OXNAD1Q96HP4 312 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CCDC74BQ96LY2 380 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 TAAR9Q96RI9 348 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 NUDT22Q9BRQ3 303 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 TIMM29Q9BSF4 260 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 RSRP1Q9BUV0 290 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 GRIP2Q9C0E4 1043 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CPNE5Q9HCH3 593 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 PRDM8Q9NQV8 689 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 IL17CQ9P0M4 197 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 FEZ2Q9UHY8 353 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 ACSL6Q9UKU0 697 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 GPC6Q9Y625 555 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 PLXNB3Q9ULL4 1909 aa7.21□□□□□ -1.25
SCFD1-222ENST00000556768 TDRD6O60522 2096 aaKnown RBP7.21□□□□□ -1.25
SCFD1-222ENST00000556768 A0A1W2PNU3 283 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-222ENST00000556768 MTX2O75431 263 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 AGTP01019 485 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 PYGMP11217 842 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 XRCC1P18887 633 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-222ENST00000556768 ITIH1P19827 911 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 RPL10P27635 214 aaKnown RBP7.21□□□□□ -1.26
SCFD1-222ENST00000556768 CHRNA4P43681 627 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 ARSDP51689 593 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 C19orf57Q0VDD7 668 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 TAF1AQ15573 450 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-222ENST00000556768 SEPT7Q16181 437 aaKnown RBP7.21□□□□□ -1.26
SCFD1-222ENST00000556768 P3H1Q32P28 736 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 C4orf17Q53FE4 359 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 SOWAHCQ53LP3 525 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms