RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 SCRG1O75711 98 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 SERPINC1P01008 464 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 RAB40ALP0C0E4 278 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 BPIP17213 487 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 COL8A1P27658 744 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 PTGIRP43119 386 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 GSDMDP57764 484 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 TMEM115Q12893 351 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 GTF2H3Q13889 308 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 PDK2Q15119 407 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 DNTTIP2Q5QJE6 756 aaKnown RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 E4F1Q66K89 784 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 SLC6A19Q695T7 634 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 C11orf96Q7Z7L8 435 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 TRAPPC5Q8IUR0 188 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 TMEM126BQ8IUX1 230 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 MAP7D3Q8IWC1 876 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 D2HGDHQ8N465 521 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 Q8NA96 180 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 BRSK1Q8TDC3 778 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 ADAMTS17Q8TE56 1095 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 LRRN4Q8WUT4 740 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 HDAC11Q96DB2 347 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 BTBD6Q96KE9 485 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 TTC25Q96NG3 672 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 LRFN5Q96NI6 719 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 VPS35Q96QK1 796 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 TRIB3Q96RU7 358 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 SRPK1Q96SB4 655 aaKnown RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 MFRPQ9BY79 579 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 CHST8Q9H2A9 424 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 MAP10Q9P2G4 905 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF711Q9Y462 761 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 SEC16AO15027 2179 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 KCNK1O00180 336 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 TMEM63AO94886 807 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 CLDN1O95832 211 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 LDLRP01130 860 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 SLC4A1P02730 911 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 PIRTP0C851 137 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 SKILP12757 684 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 GBE1Q04446 702 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 GPS2Q13227 327 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 PLCL1Q15111 1095 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 RPE65Q16518 533 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 ATP13A4Q4VNC1 1196 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 KHDC1Q4VXA5 237 aaKnown RBP11.62□□□□□ -0.55
ACTN1-221ENST00000556571 TMTC4Q5T4D3 741 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 CERS6Q6ZMG9 384 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 MED25Q71SY5 747 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 AMZ2Q86W34 360 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 TICAM1Q8IUC6 712 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 CARFQ8N187 725 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 RBMXL3Q8N7X1 1067 aaKnown RBP11.62□□□□□ -0.55
ACTN1-221ENST00000556571 CNTD1Q8N815 330 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 TMEM102Q8N9M5 508 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-221ENST00000556571 GLIS1Q8NBF1 620 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 FDCSPQ8NFU4 85 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 GDAP1Q8TB36 358 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-221ENST00000556571 NLNQ9BYT8 704 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 THAP2Q9H0W7 228 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 LATS2Q9NRM7 1088 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 HRASLS2Q9NWW9 162 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 GPR83Q9NYM4 423 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 ERRFI1Q9UJM3 462 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-221ENST00000556571 TMPRSS11EQ9UL52 423 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 SNX7Q9UNH6 387 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 POLEQ07864 2286 aa11.62□□□□□ -0.55
ACTN1-221ENST00000556571 CRYBG3Q68DQ2 2970 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 OR5K3A6NET4 321 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 MEN1O00255 615 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF185O15231 689 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ZBTB11O95625 1053 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 CYP1A2P05177 515 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 VAV2P52735 878 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 RRADP55042 308 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 IFI35P80217 286 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 CDK18Q07002 472 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 DMPKQ09013 629 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 SLC10A2Q12908 348 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ZBTB17Q13105 803 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 GPR19Q15760 415 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ATP13A5Q4VNC0 1218 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 PLEKHS1Q5SXH7 462 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 NT5DC3Q86UY8 548 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 PQLC3Q8N755 202 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ENDOVQ8N8Q3 282 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 SLC38A9Q8NBW4 561 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 GPR150Q8NGU9 434 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ZFPM2Q8WW38 1151 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 CPT1BQ92523 772 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 FAF2Q96CS3 445 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF501Q96CX3 271 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms