RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GTF2H3Q13889 308 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 KRT81Q14533 505 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 IHHQ14623 411 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 QPCTQ16769 361 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 PLEKHS1Q5SXH7 462 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 SP5Q6BEB4 398 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-219ENST00000556432 TIGD7Q6NT04 549 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-219ENST00000556432 WASH2PQ6VEQ5 465 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 LRRC49Q8IUZ0 686 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 D2HGDHQ8N465 521 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 CLEC1AQ8NC01 280 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 GPR150Q8NGU9 434 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 GDAP1Q8TB36 358 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 CD180Q99467 661 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 SLC7A5P2Q9GIP4 190 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 ZFYVE1Q9HBF4 777 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 TMEM63CQ9P1W3 806 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 SHOC2Q9UQ13 582 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 OSGIN2Q9Y236 505 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 WDR37Q9Y2I8 494 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 ADGRG4Q8IZF6 3080 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 C9J4A7 227 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 VEGFDO43915 354 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 MFSD11O43934 449 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZG16O60844 167 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZBTB11O95625 1053 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-219ENST00000556432 PIRTP0C851 137 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 TCF4P15884 667 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 FERP16591 822 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 CYP2A7P20853 494 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 NIPAL4Q0D2K0 466 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 GALNT3Q14435 633 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 LLGL1Q15334 1064 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZXDCQ2QGD7 858 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-219ENST00000556432 BOLA3Q53S33 107 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 CCDC122Q5T0U0 273 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ALG1LQ6GMV1 187 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZNF517Q6ZMY9 492 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-219ENST00000556432 OOSP2Q86WS3 158 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZNF547Q8IVP9 402 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 SYTL1Q8IYJ3 562 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZADH2Q8N4Q0 377 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 TRAM1L1Q8N609 369 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 GPR26Q8NDV2 337 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 TM9SF4Q92544 642 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 ZNF501Q96CX3 271 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-219ENST00000556432 TTC25Q96NG3 672 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 NUP85Q9BW27 656 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 TLR10Q9BXR5 811 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 RAD18Q9NS91 495 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 HRASLS2Q9NWW9 162 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 MYO1AQ9UBC5 1043 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 PADI2Q9Y2J8 665 aa13.61□□□□□ -0.23
ACTN1-219ENST00000556432 OR5K3A6NET4 321 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 ANKRD66B4E2M5 251 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 MATN3O15232 486 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 HLA-DQB2P05538 268 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 RARAP10276 462 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 PCK1P35558 622 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 CD86P42081 329 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 ARCN1P48444 511 aaKnown RBP13.6□□□□□ -0.23
ACTN1-219ENST00000556432 DCDC1P59894 354 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 UBE2HP62256 183 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 BECN1Q14457 450 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 NCF4Q15080 339 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
ACTN1-219ENST00000556432 RPE65Q16518 533 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 PTCHD3Q3KNS1 767 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
ACTN1-219ENST00000556432 PDPK2PQ6A1A2 396 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 FAM198BQ6UWH4 519 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 ST6GALNAC3Q8NDV1 305 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 ARRDC2Q8TBH0 407 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 LRFN5Q96NI6 719 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 GPR63Q9BZJ6 419 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 ACTR5Q9H9F9 607 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-219ENST00000556432 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 LATS2Q9NRM7 1088 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 IMP3Q9NV31 184 aaKnown RBP13.6□□□□□ -0.23
ACTN1-219ENST00000556432 NTNG1Q9Y2I2 539 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 SCINQ9Y6U3 715 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 CELSR1Q9NYQ6 3014 aa13.6□□□□□ -0.23
ACTN1-219ENST00000556432 CCDC168Q8NDH2 2452 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 PIKFYVEQ9Y2I7 2098 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 TMEM150CB9EJG8 249 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 PEX12O00623 359 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 KLHL41O60662 606 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 LCA5LO95447 670 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 FTLP02792 175 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-219ENST00000556432 UBXN1Q04323 297 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 ABRQ12979 859 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 XRCC4Q13426 336 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 MYBPC3Q14896 1274 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 FBXO38Q6PIJ6 1188 aa13.59□□□□□ -0.23
ACTN1-219ENST00000556432 MRGPREQ86SM8 312 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms