RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 HALP42357 657 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PRLHRP49683 370 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ARSDP51689 593 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 DRG2P55039 364 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 CDK16Q00536 496 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ACVR1Q04771 509 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 NFE2L1Q14494 772 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 TPSAB1Q15661 275 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PHF19Q5T6S3 580 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 TSTD2Q5T7W7 516 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 TTC27Q6P3X3 843 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 FAM83HQ6ZRV2 1179 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 RAB11FIP2Q7L804 512 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 SERPINA9Q86WD7 417 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 TRIM48Q8IWZ4 208 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 RBM12BQ8IXT5 1001 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 FBXO39Q8N4B4 442 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PPHLN1Q8NEY8 458 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 OR4D9Q8NGE8 314 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ACTRT1Q8TDG2 376 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 COG1Q8WTW3 980 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 FGF11Q92914 225 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 MAGOHBQ96A72 148 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PRR11Q96HE9 360 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 AHCYL2Q96HN2 611 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 LINC00615Q96LM1 132 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 SLC46A1Q96NT5 459 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 AP1M1Q9BXS5 423 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ZMYND15Q9H091 742 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 FAM96AQ9H5X1 160 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 TCAF1Q9Y4C2 921 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CCDC78A2IDD5 438 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 MGAT4DA6NG13 374 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 HGSO14964 777 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 PHF2O75151 1096 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 THRAP10827 490 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 TCP1P17987 556 aaKnown RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 FOXN2P32314 431 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 EIF2S3P41091 472 aaKnown RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 SLC19A1P41440 591 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 MAGEA6P43360 314 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CDKN1CP49918 316 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 LIMK2P53671 638 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 ITIH4Q14624 930 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 DBN1Q16643 649 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 NKAIN2Q5VXU1 208 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 WDR74Q6RFH5 385 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 AFTPHQ6ULP2 937 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 ZNF574Q6ZN55 896 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 TMEM26Q6ZUK4 368 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CLEC14AQ86T13 490 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 BEND7Q8N7W2 519 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 OR2L2Q8NH16 312 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 HM13Q8TCT9 377 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CMKLR1Q99788 373 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-206ENST00000556375 PYCARDQ9ULZ3 195 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 WDR37Q9Y2I8 494 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 AHCTF1Q8WYP5 2266 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 PTPRQQ9UMZ3 2332 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 NBEAQ8NFP9 2946 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
SLIRP-206ENST00000556375 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 OR51F1A6NGY5 319 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
SLIRP-206ENST00000556375 TNFSF15O95150 251 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 KRT14P02533 472 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 JMJD7P0C870 316 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 PRSS56P0CW18 603 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 HGFP14210 728 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-206ENST00000556375 COILP38432 576 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-206ENST00000556375 FNTAP49354 379 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 PPM1FP49593 454 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-206ENST00000556375 VPS41P49754 854 aa11.3□□□□□ -0.6
SLIRP-206ENST00000556375 SESN2P58004 480 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms