RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ATP1A2P50993 1020 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ZNF140P52738 457 aaPredicted RBP11.62□□□□□ -0.55
VRK1-204ENST00000555351 GSTM4Q03013 218 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 BCL7AQ4VC05 210 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 MANEAQ5SRI9 462 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 KLHL35Q6PF15 583 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 CEACAM20Q6UY09 585 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 LINC00523Q86TU6 105 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ZNF761Q86XN6 746 aaPredicted RBP11.62□□□□□ -0.55
VRK1-204ENST00000555351 FAM71DQ8N9W8 422 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 SPC24Q8NBT2 197 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 TTC9Q92623 222 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ART4Q93070 314 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 TBC1D10AQ9BXI6 508 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 ASB8Q9H765 288 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 TMEM9Q9P0T7 183 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 DNAJC16Q9Y2G8 782 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 CAPN6Q9Y6Q1 641 aa11.62□□□□□ -0.55
VRK1-204ENST00000555351 IGLV3-16A0A075B6K0 115 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 TRBV5-4A0A0C4DH59 114 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 C17orf113A0A1B0GUU1 675 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 MGAT4DA6NG13 374 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 EFCAB7A8K855 629 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 CAPN5O15484 640 aaPredicted RBP11.61□□□□□ -0.55
VRK1-204ENST00000555351 EFSO43281 561 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 LDB2O43679 373 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 BUD23O43709 281 aaKnown RBP11.61□□□□□ -0.55
VRK1-204ENST00000555351 AP2A1O95782 977 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 ITGALP20701 1170 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 AKT1P31749 480 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 CAPZBP47756 277 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 PPM1FP49593 454 aaPredicted RBP11.61□□□□□ -0.55
VRK1-204ENST00000555351 CTSCP53634 463 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 LAMB3Q13751 1172 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 PLA2G4EQ3MJ16 856 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 CYB5D1Q6P9G0 228 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 TMEM220Q6QAJ8 160 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 PCSK4Q6UW60 755 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 PRSS42Q7Z5A4 293 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 SNX20Q7Z614 316 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 ZFAND4Q86XD8 727 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 NXPE1Q8N323 547 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 OR2L2Q8NH16 312 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 SGF29Q96ES7 293 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 ZDHHC12Q96GR4 267 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 C9orf72Q96LT7 481 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 FAM118BQ9BPY3 351 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 APOL2Q9BQE5 337 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 TRIT1Q9H3H1 467 aaKnown RBP11.61□□□□□ -0.55
VRK1-204ENST00000555351 NLE1Q9NVX2 485 aaPredicted RBP11.61□□□□□ -0.55
VRK1-204ENST00000555351 OCIAD1Q9NX40 245 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 OGFRQ9NZT2 677 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 SEMA5BQ9P283 1151 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 FKBPLQ9UIM3 349 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 PACSIN2Q9UNF0 486 aaPredicted RBP11.61□□□□□ -0.55
VRK1-204ENST00000555351 B3GALT1Q9Y5Z6 326 aa11.61□□□□□ -0.55
VRK1-204ENST00000555351 OR52A4PA6NMU1 304 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 CFAP99D6REC4 459 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 METTL18O95568 372 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 AMD1P17707 334 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 MPSTP25325 297 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 RPL10P27635 214 aaKnown RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 NDUFS1P28331 727 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 FDFT1P37268 417 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 PRLHRP49683 370 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 ARSDP51689 593 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 DRG2P55039 364 aaKnown RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 C19orf57Q0VDD7 668 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 MAP7Q14244 749 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 GPR18Q14330 331 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 IL11RAQ14626 422 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 PTPRCAPQ14761 206 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 CLCA4Q14CN2 919 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 TGIF1Q15583 401 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 OASLQ15646 514 aaKnown RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 RPE65Q16518 533 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 FNBP1LQ5T0N5 605 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 SEL1L2Q5TEA6 688 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 FAM129CQ86XR2 697 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 SLC13A5Q86YT5 568 aaPredicted RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 CARFQ8N187 725 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 STYXQ8WUJ0 223 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 NKD1Q969G9 470 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 DCUN1D1Q96GG9 259 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 CD180Q99467 661 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 COPS8Q99627 209 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 CCM2Q9BSQ5 444 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 TMEM121Q9BTD3 319 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 ZNF768Q9H5H4 540 aaKnown RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 VPS37BQ9H9H4 285 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 SIDT1Q9NXL6 827 aaKnown RBP11.6□□□□□ -0.55
VRK1-204ENST00000555351 CRLS1Q9UJA2 301 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 PILRAQ9UKJ1 303 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 RIMKLBQ9ULI2 386 aa11.6□□□□□ -0.55
VRK1-204ENST00000555351 GUCA1BQ9UMX6 200 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms