RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 PEX13Q92968 403 aa13□□□□□ -0.33
APEX1-208ENST00000554813 HDAC10Q969S8 669 aa13□□□□□ -0.33
APEX1-208ENST00000554813 TBRG4Q969Z0 631 aaKnown RBP eCLIP13□□□□□ -0.33
APEX1-208ENST00000554813 CXorf40BQ96DE9 158 aa13□□□□□ -0.33
APEX1-208ENST00000554813 LINC00615Q96LM1 132 aaPredicted RBP13□□□□□ -0.33
APEX1-208ENST00000554813 CMKLR1Q99788 373 aa13□□□□□ -0.33
APEX1-208ENST00000554813 EPB41L1Q9H4G0 881 aa13□□□□□ -0.33
APEX1-208ENST00000554813 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
APEX1-208ENST00000554813 UCK1Q9HA47 277 aa13□□□□□ -0.33
APEX1-208ENST00000554813 THSD1Q9NS62 852 aa13□□□□□ -0.33
APEX1-208ENST00000554813 BFARQ9NZS9 450 aa13□□□□□ -0.33
APEX1-208ENST00000554813 SCHIP1Q9P0W5 487 aaPredicted RBP13□□□□□ -0.33
APEX1-208ENST00000554813 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
APEX1-208ENST00000554813 ACSL5Q9ULC5 683 aa13□□□□□ -0.33
APEX1-208ENST00000554813 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
APEX1-208ENST00000554813 UNC13CQ8NB66 2214 aa13□□□□□ -0.33
APEX1-208ENST00000554813 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 IGLV3-16A0A075B6K0 115 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 CCDC162PA2VCL2 907 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 RRP8O43159 456 aaKnown RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 TNFSF15O95150 251 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 JMJD7P0C870 316 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 BRAFP15056 766 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 TPSB2P20231 275 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 PPARGP37231 505 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 CDKN1CP49918 316 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 ARSDP51689 593 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 LIMK2P53671 638 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 SESN2P58004 480 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.33
APEX1-208ENST00000554813 NFE2L1Q14494 772 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 TPSAB1Q15661 275 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 TTC27Q6P3X3 843 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 TMEM71Q6P5X7 295 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 LRRC8BQ6P9F7 803 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 WDR74Q6RFH5 385 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 ZNF574Q6ZN55 896 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 TMEM26Q6ZUK4 368 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 TMPRSS9Q7Z410 1059 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 ZNF761Q86XN6 746 aaPredicted RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 OR13J1Q8NGT2 312 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 OR6P1Q8NGX9 317 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 GRK7Q8WTQ7 553 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 NCSTNQ92542 709 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 IL22Q9GZX6 179 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 SLC40A1Q9NP59 571 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 CHRAC1Q9NRG0 131 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 POT1Q9NUX5 634 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 PYCARDQ9ULZ3 195 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 ZNF106Q9H2Y7 1883 aaKnown RBP12.99□□□□□ -0.33
APEX1-208ENST00000554813 IGF2RP11717 2491 aa12.99□□□□□ -0.33
APEX1-208ENST00000554813 IGHV5-10-1A0A0J9YXX1 117 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 C17orf113A0A1B0GUU1 675 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 A0A1W2PNU3 283 aaPredicted RBP12.98□□□□□ -0.33
APEX1-208ENST00000554813 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 OR52A4PA6NMU1 304 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 F8W8V4 182 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 HGSO14964 777 aaPredicted RBP12.98□□□□□ -0.33
APEX1-208ENST00000554813 ZNF185O15231 689 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 PHF2O75151 1096 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 AP2A2O94973 939 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 ITGA2BP08514 1039 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 GSTM1P09488 218 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
APEX1-208ENST00000554813 NSG1P42857 185 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 MAPK9P45984 424 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 FNTAP49354 379 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 PRLHRP49683 370 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 VPS41P49754 854 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 PRAMEP78395 509 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 GSTM4Q03013 218 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 ACVR1Q04771 509 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 ITIH4Q14624 930 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 CLCA4Q14CN2 919 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 ZNF449Q6P9G9 518 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 AFTPHQ6ULP2 937 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 CERS6Q6ZMG9 384 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 LRRC69Q6ZNQ3 347 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 FAM83HQ6ZRV2 1179 aaPredicted RBP12.98□□□□□ -0.33
APEX1-208ENST00000554813 PIANPQ8IYJ0 282 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 CFAP206Q8IYR0 622 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 OR4L1Q8NH43 312 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 SNIP1Q8TAD8 396 aaKnown RBP12.98□□□□□ -0.33
APEX1-208ENST00000554813 PRR11Q96HE9 360 aaPredicted RBP12.98□□□□□ -0.33
APEX1-208ENST00000554813 SGSM3Q96HU1 749 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 ASCL3Q9NQ33 180 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 SMARCAL1Q9NZC9 954 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 SLC2A6Q9UGQ3 507 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 ANAPC5Q9UJX4 755 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 PSMD13Q9UNM6 376 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 WDR37Q9Y2I8 494 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 LOXL2Q9Y4K0 774 aa12.98□□□□□ -0.33
APEX1-208ENST00000554813 COL27A1Q8IZC6 1860 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms