RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CPPED1Q9BRF8 314 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 PACSIN1Q9BY11 444 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TNMDQ9H2S6 317 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 GSTO2Q9H4Y5 243 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 LRRC4Q9HBW1 653 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ABCC13Q9NSE7 274 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 PIH1D1Q9NWS0 290 aaKnown RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 JKAMPQ9P055 326 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SEPT10Q9P0V9 454 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CPNE7Q9UBL6 633 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TAGLN3Q9UI15 199 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 FBXO2Q9UK22 296 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ZDHHC8Q9ULC8 765 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CA5BQ9Y2D0 317 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CEP83Q9Y592 693 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CLIC4Q9Y696 253 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 U3KQA8 63 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 UBE4BO95155 1302 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ITIH6Q6UXX5 1313 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 MGAQ8IWI9 3026 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 MUC22E2RYF6 1773 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CEP192Q8TEP8 1941 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 RHPN2P1A8MT19 583 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ISM1B1AKI9 464 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NVLO15381 856 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 MFAP3LO75121 409 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NEBLO76041 1014 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 PEX11BO96011 259 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 HLA-DRAP01903 254 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CSF2P04141 144 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CD58P19256 250 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 SLC6A2P23975 617 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 AKT2P31751 481 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CCR10P46092 362 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 SGSHP51688 502 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ARFIP2P53365 341 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 PTTG1IPP53801 180 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 SUMO3P55854 103 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 RPS24P62847 133 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NOMO3P69849 1222 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CNTN1Q12860 1018 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 SLC12A1Q13621 1099 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CDH18Q13634 790 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 TGIF1Q15583 401 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 IGFBP7Q16270 282 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 FAM133BQ5BKY9 247 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF542PQ5EBM4 170 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 MANEAQ5SRI9 462 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ATXN7L2Q5T6C5 722 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 Q6ZSR6 202 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 GSPT2Q8IYD1 628 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CARNMT1Q8N4J0 409 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CCDC150Q8NCX0 1101 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NLGN4YQ8NFZ3 816 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF564Q8TBZ8 553 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 TMEM174Q8WUU8 243 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 OR8D1Q8WZ84 308 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ST8SIA2Q92186 375 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NDRG1Q92597 394 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 TFAP2CQ92754 450 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NAT6Q93015 286 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 PPP1R9BQ96SB3 815 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 IL12RB2Q99665 862 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CALN1Q9BXU9 219 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 GPR87Q9BY21 358 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 TRIM54Q9BYV2 358 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ULBP1Q9BZM6 244 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 IMPG2Q9BZV3 1241 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 ADNPQ9H2P0 1102 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CUEDC2Q9H467 287 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 PREBQ9HCU5 417 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 NLRC4Q9NPP4 1024 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 DMAC2Q9NW81 257 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 GPRC5BQ9NZH0 403 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 IPO11Q9UI26 975 aaKnown RBP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 CORO2BQ9UQ03 480 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 DAAM1Q9Y4D1 1078 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 PAXBP1Q9Y5B6 917 aa4.94□□□□□ -1.62
ATXN3-228ENST00000554592 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.94□□□□□ -1.62
ATXN3-228ENST00000554592 YJEFN3A6XGL0 299 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 E7ENQ6 273 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 XPO1O14980 1071 aaKnown RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MCF2LO15068 1137 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 KPNA5O15131 536 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ALOX15BO15296 676 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 AQP9O43315 295 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MSI1O43347 362 aaKnown RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 HAUS5O94927 633 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF202O95125 648 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 LUC7L3O95232 432 aaKnown RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 IGLV3-27P01718 113 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 LIPCP11150 499 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 BRAFP15056 766 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ANK1P16157 1881 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 PRLRP16471 622 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms