RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 AGAP3Q96P47 875 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ACOX2Q99424 681 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 LRRC1Q9BTT6 524 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 CIPCQ9C0C6 399 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 OR10A2Q9H208 303 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 GLOD4Q9HC38 313 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 PCDH9Q9HC56 1237 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 NT5MQ9NPB1 228 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 RBM22Q9NW64 420 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 KLHL8Q9P2G9 620 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 THAP10Q9P2Z0 257 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 WNT16Q9UBV4 365 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 FEZ2Q9UHY8 353 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 MUTYHQ9UIF7 546 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 CA14Q9ULX7 337 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 INVSQ9Y283 1065 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TECTAO75443 2155 aa6.34□□□□□ -1.4
SCFD1-212ENST00000554486 TTC34A8MYJ7 566 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 F5H423 210 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 GJB3O75712 270 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 GAS8O95995 478 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PLATP00750 562 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 S100BP04271 92 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 MMP2P08253 660 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 MTHFD2P13995 350 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 CR2P20023 1033 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 DRD1P21728 446 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PRKCHP24723 683 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PSMB4P28070 264 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 IL12RB1P42701 662 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 VPS41P49754 854 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 GEMIN4P57678 1058 aaKnown RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 STARD6P59095 220 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 DSC2Q02487 901 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 MGAT5Q09328 741 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 GRSF1Q12849 480 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 GPS1Q13098 491 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ENPP2Q13822 863 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 NFYCQ13952 458 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ZNF234Q14588 700 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ZNF235Q14590 738 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PPP1R7Q15435 360 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 DLG2Q15700 870 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 TEX35Q5T0J7 233 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ATXN7L2Q5T6C5 722 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 FAXCQ5TGI0 409 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 DUPD1Q68J44 220 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 C8orf74Q6P047 294 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 C22orf39Q6P5X5 142 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 USP30Q70CQ3 517 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 MAATS1Q7Z4T9 603 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 KLHDC8BQ8IXV7 354 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 UBALD2Q8IYN6 164 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PCDH20Q8N6Y1 951 aaKnown RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ZNF366Q8N895 744 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 CCDC89Q8N998 374 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ATP11CQ8NB49 1132 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 KDM1BQ8NB78 822 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 SPATA22Q8NHS9 363 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 CCDC26Q8TAB7 109 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ARRDC2Q8TBH0 407 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 NSMCE1Q8WV22 266 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 UCMAQ8WVF2 138 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 CASKIN2Q8WXE0 1202 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 VOPP1Q96AW1 172 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ISG20Q96AZ6 181 aaKnown RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 TADA1Q96BN2 335 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 OXNAD1Q96HP4 312 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PSKH2Q96QS6 385 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 VAT1Q99536 393 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 FERMT1Q9BQL6 677 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 MGME1Q9BQP7 344 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 CINPQ9BW66 212 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 TM6SF2Q9BZW4 377 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 GBA3Q9H227 469 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 TMEM245Q9H330 911 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 TCF7L1Q9HCS4 588 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ZDHHC4Q9NPG8 344 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 ARHGEF3Q9NR81 526 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 PAK5Q9P286 719 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 SLC25A13Q9UJS0 675 aa6.33□□□□□ -1.4
SCFD1-212ENST00000554486 G3BP2Q9UN86 482 aaKnown RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 MTF2Q9Y483 593 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-212ENST00000554486 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 WASH3PC4AMC7 463 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 TP73O15350 636 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 INSIG1O15503 277 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 HEXIM1O94992 359 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 MT-CYBP00156 380 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 GSRP00390 522 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RHOXF2BP0C7M4 288 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 CHRNB1P11230 501 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 HLA-EP13747 358 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 GKP32189 559 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 FDFT1P37268 417 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 HSPA9P38646 679 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 CD86P42081 329 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 WASP42768 502 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RPL21P46778 160 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms