RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 VASNQ6EMK4 673 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TXNRD3NBQ6F5E7 133 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TWF2Q6IBS0 349 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SDE2Q6IQ49 451 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 RWDD4Q6NW29 188 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 EPGNQ6UW88 154 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PACS1Q6VY07 963 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 RAPH1Q70E73 1250 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 STRADAQ7RTN6 431 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TRMT1LQ7Z2T5 733 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM110Q86TL2 294 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 UNC93AQ86WB7 457 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TTC30AQ86WT1 665 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 COLGALT2Q8IYK4 626 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 DEFB107AQ8IZN7 70 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 LRRC71Q8N4P6 559 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ARFGAP1Q8N6T3 406 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TNIP2Q8NFZ5 429 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PJA1Q8NG27 643 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 JOSD2Q8TAC2 188 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 HM13Q8TCT9 377 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 URGCPQ8TCY9 931 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ADAMTS17Q8TE56 1095 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TFB1MQ8WVM0 346 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SMG7Q92540 1137 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PGBD4Q96DM1 585 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 CCDC126Q96EE4 140 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 DUS3LQ96G46 650 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 C20orf173Q96LM9 149 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 FAM193BQ96PV7 902 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 CPXM1Q96SM3 734 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM175Q9BSA9 504 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 APOL6Q9BWW8 343 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 OSBPL11Q9BXB4 747 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 NUF2Q9BZD4 464 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 OSBPL6Q9BZF3 934 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SLC13A1Q9BZW2 595 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ILKAPQ9H0C8 392 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 CDH19Q9H159 772 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SNX25Q9H3E2 840 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 FZD8Q9H461 694 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 LRRC40Q9H9A6 602 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 EFCAB1Q9HAE3 211 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TRPC7Q9HCX4 862 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PTPRHQ9HD43 1115 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TCF7L2Q9NQB0 619 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 DLL4Q9NR61 685 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 VPS45Q9NRW7 570 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 NTMQ9P121 344 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 HESX1Q9UBX0 185 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PCSK1NQ9UHG2 260 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 RAP2CQ9Y3L5 183 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ZFP37Q9Y6Q3 630 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 NUMBLQ9Y6R0 609 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 VPS13AQ96RL7 3174 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 NCOR2Q9Y618 2525 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 KANSL1LA0AUZ9 987 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PRAMEF25A6NGN4 478 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 E5RJQ4 531 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ANHXE9PGG2 379 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 MATN2O00339 956 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 TBC1D4O60343 1298 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 NOBOXO60393 691 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 BANF1O75531 89 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 BCAS2O75934 225 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 USP1O94782 785 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 MPIG6BO95866 241 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ADRB1P08588 477 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 FAM163BP0C2L3 166 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CSH1P0DML2 217 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CSH2P0DML3 217 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 LAMP2P13473 410 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF23P17027 643 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 POU3F2P20265 443 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ITGAXP20702 1163 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ME2P23368 584 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 RBL1P28749 1068 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 GJA4P35212 333 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CPA2P48052 419 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 KCNC1P48547 511 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 NPY2RP49146 381 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 LIMK2P53671 638 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 NAA20P61599 178 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ESRRGP62508 458 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 IRF9Q00978 393 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 KLF10Q13118 480 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 STX5Q13190 355 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 HTR4Q13639 388 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 APOFQ13790 326 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 FLOT2Q14254 428 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PSMD5Q16401 504 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 KCNT1Q5JUK3 1230 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CATSPEREQ5SY80 951 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 SEL1L3Q68CR1 1132 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ARHGAP17Q68EM7 881 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ITPRIPL1Q6GPH6 555 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 OR6B2Q6IFH4 312 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PKN3Q6P5Z2 889 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 DHRS4L2Q6PKH6 230 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms