RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 JPH3Q8WXH2 748 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 KLHL6Q8WZ60 621 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ZDHHC12Q96GR4 267 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 OXNAD1Q96HP4 312 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PDLIM2Q96JY6 352 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF514Q96K75 400 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 TTC25Q96NG3 672 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 FCRL4Q96PJ5 515 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PPP1R2P1Q96PQ5 205 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 FERMT1Q9BQL6 677 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 FSD1LQ9BXM9 530 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 SLC25A18Q9H1K4 315 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 CLMPQ9H6B4 373 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 GPN2Q9H9Y4 310 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 APMAPQ9HDC9 416 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 UBP1Q9NZI7 540 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PKP3Q9Y446 797 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 HYOU1Q9Y4L1 999 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PCDHA13Q9Y5I0 950 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 EPN1Q9Y6I3 576 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 SLC30A1Q9Y6M5 507 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 NUP210LQ5VU65 1888 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 LOC101059948A0A1B0GTJ6 334 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 C5orf60A6NFR6 353 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 AGAP14A8MT82 685 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 GAPDHSO14556 408 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 NDUFA10O95299 355 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 WISP1O95388 367 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 MT-ND3P03897 115 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 PYGMP11217 842 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 FGF5P12034 268 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 TYRP1P17643 537 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 NELFEP18615 380 aaKnown RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 LPOP22079 712 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 RPL10P27635 214 aaKnown RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CTNNA1P35221 906 aaKnown RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 STAT5AP42229 794 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CHRNA4P43681 627 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 MARCKSL1P49006 195 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CSRP3P50461 194 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 POLE2P56282 527 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CYP4F2P78329 520 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 PDE1BQ01064 536 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KCNC4Q03721 635 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CDC20Q12834 499 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KCNAB2Q13303 367 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CLCA4Q14CN2 919 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 TAF1AQ15573 450 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CHRNA6Q15825 494 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 LONRF2Q1L5Z9 754 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 PLA2G4EQ3MJ16 856 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 METRNLQ641Q3 311 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KAZNQ674X7 775 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 RANBP10Q6VN20 620 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 B4GALNT4Q76KP1 1039 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KMT5CQ86Y97 462 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CCDC50Q8IVM0 306 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KLHDC8BQ8IXV7 354 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CARFQ8N187 725 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 BEND7Q8N7W2 519 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 RASGEF1AQ8N9B8 481 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 SPC24Q8NBT2 197 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 IPMKQ8NFU5 416 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 GDAP1Q8TB36 358 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 BLOC1S5Q8TDH9 187 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 UBXN4Q92575 508 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KRT35Q92764 455 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CXorf40BQ96DE9 158 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 LINC00615Q96LM1 132 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 TGM7Q96PF1 710 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CD180Q99467 661 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CTRCQ99895 268 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 TSGA10Q9BZW7 698 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 GBA3Q9H227 469 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 GOLPH3Q9H4A6 298 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 BPIFA1Q9NP55 256 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 KLHL3Q9UH77 587 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 RSPH14Q9UHP6 348 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 DNAJC16Q9Y2G8 782 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 WDR37Q9Y2I8 494 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 AAR2Q9Y312 384 aaKnown RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 PCDHA3Q9Y5H8 950 aa6.48□□□□□ -1.37
SLIRP-203ENST00000554074 RP1L1Q8IWN7 2480 aaPredicted RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 TNRC6AQ8NDV7 1962 aaKnown RBP6.48□□□□□ -1.37
SLIRP-203ENST00000554074 CCDC66A2RUB6 948 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 MGAT4DA6NG13 374 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 TLCD2A6NGC4 264 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 OR52A4PA6NMU1 304 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 C2orf81A6NN90 581 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 H7C0C1 242 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 PYCARD-AS1I3L0S3 204 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 STX7O15400 261 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 NKX2-8O15522 239 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 PJA2O43164 708 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A9O60656 530 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 POP7O75817 140 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 STK10O94804 968 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms