RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DTX3LQ8TDB6 740 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 MZB1Q8WU39 189 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 TSPAN17Q96FV3 270 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 GPR22Q99680 433 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 SELENOSQ9BQE4 189 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 MKRN2Q9H000 416 aaKnown RBP14.32□□□□□ -0.12
SHMT2-208ENST00000553868 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-208ENST00000553868 KCTD5Q9NXV2 234 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 USP36Q9P275 1121 aaKnown RBP14.32□□□□□ -0.12
SHMT2-208ENST00000553868 NFKBIL1Q9UBC1 381 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-208ENST00000553868 PCDHGA1Q9Y5H4 931 aa14.32□□□□□ -0.12
SHMT2-208ENST00000553868 HEMK1Q9Y5R4 338 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-208ENST00000553868 OR51F1A6NGY5 319 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 AREL1O15033 823 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 POLR3GO15318 223 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 AP1G1O43747 822 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 SRP72O76094 671 aaKnown RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 PRAMEF1O95521 474 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 S1PR4O95977 384 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 AHSGP02765 367 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 C1SP09871 688 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 BPIP17213 487 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 KRT4P19013 534 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 ACADVLP49748 655 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 AFF3P51826 1226 aaKnown RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 SLC12A2P55011 1212 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 XIAPP98170 497 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 MPP1Q00013 466 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 PTSQ03393 145 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 ITGA9Q13797 1035 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 BMPR2Q13873 1038 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 TTC31Q49AM3 519 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 TMEM52BQ4KMG9 183 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 LRRC73Q5JTD7 316 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 FAM151BQ6UXP7 276 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 KDM7AQ6ZMT4 941 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 TAS2R42Q7RTR8 314 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 SNX20Q7Z614 316 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 CCDC91Q7Z6B0 441 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 ULK4Q96C45 1275 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 EID2BQ96D98 161 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 CNDP2Q96KP4 475 aaKnown RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 MCMBPQ9BTE3 642 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 CCDC68Q9H2F9 335 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 KCNK9Q9NPC2 374 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 ITM2CQ9NQX7 267 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 FBXO6Q9NRD1 293 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 NKIRAS1Q9NYS0 192 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 MARCH4Q9P2E8 410 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-208ENST00000553868 DOPEY1Q5JWR5 2465 aa14.31□□□□□ -0.12
SHMT2-208ENST00000553868 ABCA12Q86UK0 2595 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 A0A1W2PPM1 405 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 A6NNZ2 444 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 MID1O15344 667 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 KLK10O43240 276 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 TSPAN6O43657 245 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 LDOC1O95751 146 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 MPOP05164 745 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 TYK2P29597 1187 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 TPMTP51580 245 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 SLC18A1P54219 525 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 RPS14P62263 151 aaKnown RBP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 POU4F1Q01851 419 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 VAC14Q08AM6 782 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 CNTN1Q12860 1018 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 RALGDSQ12967 914 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 NFATC2Q13469 925 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 PEX6Q13608 980 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 USP10Q14694 798 aaKnown RBP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ZNF284Q2VY69 593 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 TUBB8Q3ZCM7 444 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 LIPIQ6XZB0 460 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ZNF574Q6ZN55 896 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 FAM124AQ86V42 546 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ZNF398Q8TD17 642 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 CXorf40AQ8TE69 158 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 GANCQ8TET4 914 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ISL2Q96A47 359 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ATXN7L3BQ96GX2 97 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ELMO2Q96JJ3 720 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 OMDQ99983 421 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 IQCGQ9H095 443 aaKnown RBP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 FAM83DQ9H4H8 585 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 ASB8Q9H765 288 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 IL26Q9NPH9 171 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 CRLS1Q9UJA2 301 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 SRPK3Q9UPE1 567 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 NCKAP1Q9Y2A7 1128 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 COMMD10Q9Y6G5 202 aa14.3□□□□□ -0.12
SHMT2-208ENST00000553868 TP53BP1Q12888 1972 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-208ENST00000553868 A0A0U1RQS6 177 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 FAM95CA0A1B0GW59 222 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 FAM47DPA6NHR8 397 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 COPEO14579 308 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 WNT9AO14904 365 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 HAUS5O94927 633 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 CRABP2P29373 138 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 CCNFP41002 786 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms