RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PDZD2O15018 2839 aa5.98□□□□□ -1.45
ATXN3-223ENST00000553686 ANKHD1Q8IWZ3 2542 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 FAM92AA1XBS5 289 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 TARSL2A2RTX5 802 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CCDC151A5D8V7 595 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 M0QYG6 137 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 MGST3O14880 152 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 HCRTO43612 131 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 JAK2O60674 1132 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 NEBLO76041 1014 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 POLR2EP19388 210 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 WARSP23381 471 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 MAT2AP31153 395 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CCKBRP32239 447 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 ADPRHP54922 357 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 MPPE1Q53F39 396 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 KHDC1LQ5JSQ8 128 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CHST9Q7L1S5 443 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 MMAAQ8IVH4 418 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CCDC13Q8IYE1 715 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 BOLLQ8N9W6 283 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 FAM98AQ8NCA5 519 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 FAM46DQ8NEK8 389 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 BRIX1Q8TDN6 353 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 WASF1Q92558 559 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 LRGUKQ96M69 825 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CCDC3Q9BQI4 270 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CALN1Q9BXU9 219 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 AGXT2Q9BYV1 514 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 RAB34Q9BZG1 259 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 UNKQ9C0B0 810 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 INTS2Q9H0H0 1204 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 SARS2Q9NP81 518 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 KCND2Q9NZV8 630 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 SLC17A6Q9P2U8 582 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CYTH4Q9UIA0 394 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 AGO2Q9UKV8 859 aaKnown RBP5.97□□□□□ -1.45
ATXN3-223ENST00000553686 PADI4Q9UM07 663 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 TP53TG5Q9Y2B4 290 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 ARID2Q68CP9 1835 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 CCDC168Q8NDH2 2452 aa5.97□□□□□ -1.45
ATXN3-223ENST00000553686 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 CRYBG3Q68DQ2 2970 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 MYO18AQ92614 2054 aaKnown RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 E9PMD0 336 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 SLC7A4O43246 635 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 AQP9O43315 295 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 TACC1O75410 805 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 IGLV2-14P01704 120 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 HGFP14210 728 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ITGALP20701 1170 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 PSMA5P28066 241 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 AKT2P31751 481 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 GRIA3P42263 894 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 TOB1P50616 345 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 PDX1P52945 283 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 MAPK10P53779 464 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 EPHB1P54762 984 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 DEFB109BQ30KR1 87 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 HNRNPA1L2Q32P51 320 aaKnown RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 POM121L1PQ3SYA9 428 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 C10orf120Q5SQS8 335 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KRT79Q5XKE5 535 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 NUGGCQ68CJ6 796 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 PPP1R32Q7Z5V6 425 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 PEG10Q86TG7 708 aaKnown RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 TRIM69Q86WT6 500 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 CPXM2Q8N436 756 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ZNF557Q8N988 423 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KDM1BQ8NB78 822 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 PDCD6IPQ8WUM4 868 aaKnown RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KBTBD7Q8WVZ9 684 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KIAA1143Q96AT1 154 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 HDAC11Q96DB2 347 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ZNF274Q96GC6 653 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 HPDLQ96IR7 371 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 SLC45A3Q96JT2 553 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 JAKMIP1Q96N16 626 aaKnown RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 OSBPL9Q96SU4 736 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KCNK16Q96T55 309 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 MED10Q9BTT4 135 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ZNF518BQ9C0D4 1074 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 DMAP1Q9NPF5 467 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KLC4Q9NSK0 619 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ABCB8Q9NUT2 735 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ZIM2Q9NZV7 527 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 IPO11Q9UI26 975 aaKnown RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 ERRFI1Q9UJM3 462 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-223ENST00000553686 GGA2Q9UJY4 613 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 CLEC4EQ9ULY5 219 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 KIAA1549LQ6ZVL6 1849 aa5.96□□□□□ -1.46
ATXN3-223ENST00000553686 D6RAR5 112 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 NKX2-8O15522 239 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 IGHDP01880 384 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 KLKB1P03952 638 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 CSF2P04141 144 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 TMEM191BP0C7N4 346 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 RALAP11233 206 aa5.95□□□□□ -1.46
ATXN3-223ENST00000553686 LIFP15018 202 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms