RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PPARGP37231 505 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ZNF140P52738 457 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 DCDC1P59894 354 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 GTF2H3Q13889 308 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 AARS2Q5JTZ9 985 aaKnown RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 HP1BP3Q5SSJ5 553 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ARMC3Q5W041 872 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ZNF574Q6ZN55 896 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 CAPN12Q6ZSI9 719 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ZNF534Q76KX8 674 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 RAB11FIP2Q7L804 512 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 TAS2R42Q7RTR8 314 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 TMC3Q7Z5M5 1100 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 CAND1Q86VP6 1230 aaKnown RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 PHYKPLQ8IUZ5 450 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ANKMY2Q8IV38 441 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 PHACTR4Q8IZ21 702 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 TRAM1L1Q8N609 369 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 FBXO36Q8NEA4 188 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 PYROXD1Q8WU10 500 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ASB12Q8WXK4 309 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 VOPP1Q96AW1 172 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ULK4Q96C45 1275 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 TTC25Q96NG3 672 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 LRRC61Q9BV99 259 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ACSL6Q9UKU0 697 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 NFU1Q9UMS0 254 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 KCTD3Q9Y597 815 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 LRP4O75096 1905 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 CFAP99D6REC4 459 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 LMO7DNF2Z398 122 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 CCL22O00626 93 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 INPP4BO15327 924 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 BANF1O75531 89 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ANXA6P08133 673 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 RALBP11234 206 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 BPIP17213 487 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 KELP23276 732 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 IGFALSP35858 605 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ELK3P41970 407 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 PTK2BQ14289 1009 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 FNBP1LQ5T0N5 605 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 PDPK2PQ6A1A2 396 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ESRP1Q6NXG1 681 aaKnown RBP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 DOK6Q6PKX4 331 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 HEATR4Q86WZ0 1026 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 MPP5Q8N3R9 675 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 PEX13Q92968 403 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 SCAMP4Q969E2 229 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 DCUN1D1Q96GG9 259 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 EBNA1BP2Q99848 306 aaKnown RBP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ABCG8Q9H221 673 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ASB8Q9H765 288 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 SUDS3Q9H7L9 328 aaPredicted RBP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 VPS37BQ9H9H4 285 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 CHRAC1Q9NRG0 131 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 C20orf96Q9NUD7 363 aaPredicted RBP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 NLE1Q9NVX2 485 aaPredicted RBP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 IL17CQ9P0M4 197 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ANKMY1Q9P2S6 941 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 FAM169AQ9Y6X4 670 aa11.24□□□□□ -0.61
TMEM116-218ENST00000552839 ZFC3H1O60293 1989 aaKnown RBP11.24□□□□□ -0.61
TMEM116-218ENST00000552839 FAM237BA0A1B0GVD1 139 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 A0A1W2PQM1 296 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TOR1BO14657 336 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 NVLO15381 856 aaKnown RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 LDB2O43679 373 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 USP1O94782 785 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CELA2BP08218 269 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 LIPCP11150 499 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 SFTPCP11686 197 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 WT1P19544 449 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 MSH3P20585 1137 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 NMBRP28336 390 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 PHBP35232 272 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 INHBCP55103 352 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CCL7P80098 99 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TLE1Q04724 770 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CACNG1Q06432 222 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 EIF3IQ13347 325 aaKnown RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 INPP5AQ14642 412 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 PTPRCAPQ14761 206 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TBR1Q16650 682 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 LONRF1Q17RB8 773 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 WSCD2Q2TBF2 565 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 MAP9Q49MG5 647 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 SPANXN3Q5MJ09 141 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 MRNIPQ6NTE8 343 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 PNCKQ6P2M8 343 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CES3Q6UWW8 571 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 SNX20Q7Z614 316 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TECPR1Q7Z6L1 1165 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 SDCCAG8Q86SQ7 713 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms