RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TMEM126BQ8IUX1 230 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 BRSK1Q8TDC3 778 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 FAF2Q96CS3 445 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 IMP4Q96G21 291 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 TUBB2BQ9BVA1 445 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 ZCCHC2Q9C0B9 1178 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 AKIRIN1Q9H9L7 192 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 MAP10Q9P2G4 905 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 WDR37Q9Y2I8 494 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 CACNA1DQ01668 2161 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 SSU72P8A0A1W2PR75 194 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 TCP11X1B4DZS4 312 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 PTGIRP43119 386 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 TMEM115Q12893 351 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 SLC10A2Q12908 348 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 ZBTB17Q13105 803 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 PCSK7Q16549 785 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 KHDC1Q4VXA5 237 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 ZFYVE27Q5T4F4 411 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 C11orf96Q7Z7L8 435 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 PQLC3Q8N755 202 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 CNTD1Q8N815 330 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 MAP3K3Q99759 626 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 KCND1Q9NSA2 647 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 SNX7Q9UNH6 387 aa13.88□□□□□ -0.19
CHMP1A-210ENST00000551981 ABCA12Q86UK0 2595 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 OR5K3A6NET4 321 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 CEACAM4O75871 244 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 TMEM63AO94886 807 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 ZBTB11O95625 1053 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 RNF224P0DH78 156 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 DMPKQ09013 629 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 AP1B1Q10567 949 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 LAMB3Q13751 1172 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 SLC14A2Q15849 920 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 RPE65Q16518 533 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 EIF2S3LQ2VIR3 472 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 ATP13A5Q4VNC0 1218 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 HGSNATQ68CP4 663 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 ARMC6Q6NXE6 501 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 CERS6Q6ZMG9 384 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 CLEC17AQ6ZS10 378 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 MAMDC2Q7Z304 686 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 CARFQ8N187 725 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 GPR150Q8NGU9 434 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 PRR7Q8TB68 274 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 CPT1BQ92523 772 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 PNPLA2Q96AD5 504 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 LRFN5Q96NI6 719 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 AGAP3Q96P47 875 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 CEP41Q9BYV8 373 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 FANCEQ9HB96 536 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 HRASLS2Q9NWW9 162 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 LCMT1Q9UIC8 334 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 HEY1Q9Y5J3 304 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
CHMP1A-210ENST00000551981 SMTNL1A8MU46 457 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 POP7O75817 140 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 PROSCO94903 275 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 NDST3O95803 873 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 SERPING1P05155 500 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 RAB40ALP0C0E4 278 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 RRADP55042 308 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 TYRO3Q06418 890 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 GPS2Q13227 327 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 MRPL49Q13405 166 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 XRCC4Q13426 336 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 GPR19Q15760 415 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 PRR30Q53SZ7 412 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 ZDHHC20Q5W0Z9 365 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 ZNF517Q6ZMY9 492 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 TTC30BQ8N4P2 665 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 ENDOVQ8N8Q3 282 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 ADAMTS17Q8TE56 1095 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 SYN2Q92777 582 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 ZNF501Q96CX3 271 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 CHST8Q9H2A9 424 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 BPIFA1Q9NP55 256 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 LATS2Q9NRM7 1088 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 IMP3Q9NV31 184 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 SOHLH2Q9NX45 425 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 LUZP4Q9P127 313 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 TMPRSS11EQ9UL52 423 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 PSMD13Q9UNM6 376 aa13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 DNMT3AQ9Y6K1 912 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 TEP1Q99973 2627 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-210ENST00000551981 A0A1B0GTH6 734 aa13.85□□□□□ -0.19
CHMP1A-210ENST00000551981 MEN1O00255 615 aa13.85□□□□□ -0.19
CHMP1A-210ENST00000551981 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-210ENST00000551981 MTHFD1P11586 935 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-210ENST00000551981 KDELR1P24390 212 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms