RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GANQ9H2C0 597 aa14.95□□□□□ -0.02
CACNB3-220ENST00000551716 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
CACNB3-220ENST00000551716 AMACRQ9UHK6 382 aa14.95□□□□□ -0.02
CACNB3-220ENST00000551716 CHKBQ9Y259 395 aa14.95□□□□□ -0.02
CACNB3-220ENST00000551716 NTNG1Q9Y2I2 539 aa14.95□□□□□ -0.02
CACNB3-220ENST00000551716 MAP3K7O43318 606 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 STSP08842 583 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 AGXTP21549 392 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 MIPP30301 263 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 HNRNPH3P31942 346 aaKnown RBP14.94□□□□□ -0.02
CACNB3-220ENST00000551716 RORAP35398 523 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 PPP1CAP62136 330 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 MAMLD1Q13495 774 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 NCF4Q15080 339 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 GPR19Q15760 415 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 DCAF10Q5QP82 559 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 FCRL6Q6DN72 434 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 ALG1LQ6GMV1 187 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 LCN10Q6JVE6 187 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 ARMC6Q6NXE6 501 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 SPNS3Q6ZMD2 512 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 CUZD1Q86UP6 607 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 MCOLN2Q8IZK6 566 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 INPP5DQ92835 1189 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 GLYATL1Q969I3 302 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 TDRD1Q9BXT4 1180 aaKnown RBP14.94□□□□□ -0.02
CACNB3-220ENST00000551716 PCDH9Q9HC56 1237 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 HRASLS2Q9NWW9 162 aa14.94□□□□□ -0.02
CACNB3-220ENST00000551716 OR5K3A6NET4 321 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ANKRD66B4E2M5 251 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 CDK14O94921 469 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 PRLP01236 227 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 CAPN1P07384 714 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 HBQ1P09105 142 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 AMPD1P23109 780 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 EEF1GP26641 437 aaKnown RBP14.93□□□□□ -0.02
CACNB3-220ENST00000551716 OTX2P32243 289 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ARCN1P48444 511 aaKnown RBP14.93□□□□□ -0.02
CACNB3-220ENST00000551716 DRG2P55039 364 aaKnown RBP14.93□□□□□ -0.02
CACNB3-220ENST00000551716 DCDC1P59894 354 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 PLA2G4EQ3MJ16 856 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 BOLA3Q53S33 107 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ACAD10Q6JQN1 1059 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 CERS6Q6ZMG9 384 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 MRGPREQ86SM8 312 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 SYTL1Q8IYJ3 562 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 TRAM1L1Q8N609 369 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 LPCAT1Q8NF37 534 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 FAR1Q8WVX9 515 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 TEKT4Q8WW24 435 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ZFPM2Q8WW38 1151 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 RELTQ969Z4 430 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 PEBP4Q96S96 227 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 AGPAT1Q99943 283 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ADGRE3Q9BY15 652 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 XPO4Q9C0E2 1151 aaKnown RBP14.93□□□□□ -0.02
CACNB3-220ENST00000551716 SLC7A5P2Q9GIP4 190 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ACTR5Q9H9F9 607 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-220ENST00000551716 ARFGAP3Q9NP61 516 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 NLRC4Q9NPP4 1024 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 SOHLH2Q9NX45 425 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 SERTAD3Q9UJW9 196 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 BTRCQ9Y297 605 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 CSMD2Q7Z408 3487 aa14.93□□□□□ -0.02
CACNB3-220ENST00000551716 A0A1W2PQJ5 194 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 COX6B1P14854 86 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 CAPN3P20807 821 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 IL4RP24394 825 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 TSFMP43897 325 aaKnown RBP14.92□□□□□ -0.02
CACNB3-220ENST00000551716 ZNF165P49910 485 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 DPYSL2Q16555 572 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 ZNF648Q5T619 568 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-220ENST00000551716 FAM198BQ6UWH4 519 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 FJX1Q86VR8 437 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 OOSP2Q86WS3 158 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 GRHL3Q8TE85 626 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 WDR77Q9BQA1 342 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-220ENST00000551716 ZFYVE1Q9HBF4 777 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 ATP13A2Q9NQ11 1180 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 PCMTD2Q9NV79 361 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 TRIM10Q9UDY6 481 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 CROCCQ5TZA2 2017 aa14.92□□□□□ -0.02
CACNB3-220ENST00000551716 TMEM191CA6NGB0 347 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 TPM2P07951 284 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 CCDC172P0C7W6 258 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 MSL3P1P0C860 447 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 BPIP17213 487 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 CYP2A7P20853 494 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 CA5AP35218 305 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 GTF2H3Q13889 308 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 RPE65Q16518 533 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 VWA2Q5GFL6 755 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 TCP11X2Q5H9J9 407 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 FAM69BQ5VUD6 431 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 B3GNTL1Q67FW5 361 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-220ENST00000551716 TIGD7Q6NT04 549 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-220ENST00000551716 POLNQ7Z5Q5 900 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 ZNF547Q8IVP9 402 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 PARP9Q8IXQ6 854 aa14.91□□□□□ -0.02
CACNB3-220ENST00000551716 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms