RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 RWDD2AQ9UIY3 292 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 INTS6Q9UL03 887 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 AGO1Q9UL18 857 aaKnown RBP5.02□□□□□ -1.61
SCAF11-214ENST00000550893 MMP17Q9ULZ9 603 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 SCN8AQ9UQD0 1980 aa5.02□□□□□ -1.61
SCAF11-214ENST00000550893 CACNA1BQ00975 2339 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CAPN8A6NHC0 703 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 WASH3PC4AMC7 463 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PSMA7O14818 248 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 P4HA2O15460 535 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 KINO60870 393 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 EPN2O95208 641 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 KAT7O95251 611 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 AFPP02771 609 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 S100BP04271 92 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PAEPP09466 180 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 KRT13P13646 458 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CHRNB2P17787 502 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 GABRG2P18507 467 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PRKCHP24723 683 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 ANXA13P27216 316 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 HLA-FP30511 346 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CDH5P33151 784 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 IFNAR2P48551 515 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 RGS7P49802 495 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CCR3P51677 355 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 TKTL1P51854 596 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 COPAP53621 1224 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 MFAP3P55082 362 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CYP4F2P78329 520 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 BNC1Q01954 994 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 BST2Q10589 180 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PTP4A2Q12974 167 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 DMC1Q14565 340 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CCDC6Q16204 474 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PLK5Q496M5 336 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PTPN20Q4JDL3 420 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 HSP90AA4PQ58FG1 418 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 HECTD3Q5T447 861 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 SYPL2Q5VXT5 272 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 KIAA1614Q5VZ46 1190 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 TMEM270Q6UE05 265 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 Q6ZWC4 215 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 SYT13Q7L8C5 426 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 TAC4Q86UU9 113 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CSGALNACT1Q8TDX6 532 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 DQX1Q8TE96 717 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 MAML1Q92585 1016 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 SLITRK1Q96PX8 696 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 GCNAQ96QF7 691 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CPXM1Q96SM3 734 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PRMT1Q99873 361 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 GABRG3Q99928 467 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 MED10Q9BTT4 135 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 UBXN6Q9BZV1 441 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 METTL14Q9HCE5 456 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 SPHK2Q9NRA0 654 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 PLK2Q9NYY3 685 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 NOCTQ9UK39 431 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 TBC1D30Q9Y2I9 924 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.01□□□□□ -1.61
SCAF11-214ENST00000550893 IGSF10Q6WRI0 2623 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 MYLKQ15746 1914 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 CFAP46Q8IYW2 2715 aa5.01□□□□□ -1.61
SCAF11-214ENST00000550893 SHROOM3Q8TF72 1996 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 MGAQ8IWI9 3026 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 COL5A1P20908 1838 aaPredicted RBP5□□□□□ -1.61
SCAF11-214ENST00000550893 GOLGA6L7A0A1B0GV03 622 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 TCRBV5S1A1TA0A578 114 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 FAM170AA1A519 330 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 GTPBP10A4D1E9 387 aaKnown RBP5□□□□□ -1.61
SCAF11-214ENST00000550893 KCNJ18B7U540 433 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 E5RJQ4 531 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 MYO1FO00160 1098 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 SMC2O95347 1197 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 NFATC1O95644 943 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 LATS1O95835 1130 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 ZBED1O96006 694 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 NPSP0C0P6 89 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 SETSIPP0DME0 302 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 VDRP11473 427 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 DRD1P21728 446 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 CORO1AP31146 461 aaKnown RBP5□□□□□ -1.61
SCAF11-214ENST00000550893 P2RY2P41231 377 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 CXCL12P48061 93 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 PPP3CCP48454 512 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 TPTEP56180 551 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 YWHAGP61981 247 aaKnown RBP eCLIP5□□□□□ -1.61
SCAF11-214ENST00000550893 HNRNPA0Q13151 305 aaKnown RBP5□□□□□ -1.61
SCAF11-214ENST00000550893 PDCLQ13371 301 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 RAB32Q13637 225 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 CNN3Q15417 329 aaKnown RBP5□□□□□ -1.61
SCAF11-214ENST00000550893 SF3A2Q15428 464 aaKnown RBP5□□□□□ -1.61
SCAF11-214ENST00000550893 CNGA2Q16280 664 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 MEA1Q16626 185 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 FUT11Q495W5 492 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 FSCBQ5H9T9 825 aa5□□□□□ -1.61
SCAF11-214ENST00000550893 PRAMEF17Q5VTA0 474 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms