RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SLC15A2Q16348 729 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 TMEM266Q2M3C6 531 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 MYLK3Q32MK0 819 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 ATP13A5Q4VNC0 1218 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 IGSF11Q5DX21 431 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 C18orf63Q68DL7 685 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 ADALQ6DHV7 355 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 PAPD4Q6PIY7 484 aaKnown RBP4.83□□□□□ -1.64
LIMA1-205ENST00000550592 BRAT1Q6PJG6 821 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 TPRG1Q6ZUI0 275 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 CCDC190Q86UF4 302 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 RASGEF1CQ8N431 466 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 POGLUT1Q8NBL1 392 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 SLC38A9Q8NBW4 561 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 OR2AK2Q8NG84 335 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
LIMA1-205ENST00000550592 ABHD8Q96I13 439 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 RTN4RQ9BZR6 473 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 NOX4Q9NPH5 578 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 MCM9Q9NXL9 1143 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF148Q9UQR1 794 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 WBP11Q9Y2W2 641 aaKnown RBP4.83□□□□□ -1.64
LIMA1-205ENST00000550592 LOXL2Q9Y4K0 774 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 SNX9Q9Y5X1 595 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 CEP152O94986 1710 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 WDR90Q96KV7 1748 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 NWD2Q9ULI1 1742 aa4.83□□□□□ -1.64
LIMA1-205ENST00000550592 NEXMIFQ5QGS0 1516 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 CCDC141Q6ZP82 1450 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 TTC3P53804 2025 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 ADCY9O60503 1353 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 KANK1Q14678 1352 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 GPR75-ASB3A0A0A6YYF3 556 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 LINC01553A4QN01 128 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 MYMKA6NI61 221 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 HS3ST1O14792 307 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 PLPP2O43688 288 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 RFPL2O75678 378 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 RSL1D1O76021 490 aaKnown RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 OAZ2O95190 189 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 CDC25AP30304 524 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 PCYT1AP49585 367 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 LIG4P49917 911 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 TAS2R38P59533 333 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 TMF1P82094 1093 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 DHX34Q14147 1143 aaKnown RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 OASLQ15646 514 aaKnown RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 SYT16Q17RD7 645 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF549Q6P9A3 640 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 DENND5BQ6ZUT9 1274 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 CEP97Q8IW35 865 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 PGBD5Q8N414 524 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 GUF1Q8N442 669 aaKnown RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 MCUQ8NE86 351 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 GSDMBQ8TAX9 411 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 DUSP19Q8WTR2 217 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 GFI1Q99684 422 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 BAG1Q99933 345 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 PPIL3Q9H2H8 161 aaKnown RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 MMP27Q9H306 513 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 DNAJC18Q9H819 358 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 GDE1Q9NZC3 331 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 C1RLQ9NZP8 487 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 RNF7Q9UBF6 113 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 ANAPC2Q9UJX6 822 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 PPIEQ9UNP9 301 aaKnown RBP4.82□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF711Q9Y462 761 aa4.82□□□□□ -1.64
LIMA1-205ENST00000550592 ADGRL2O95490 1459 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF541Q9H0D2 1346 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 ANKRD28O15084 1053 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 SCP2P22307 547 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 HRH2P25021 359 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 HOXA11P31270 313 aaPredicted RBP4.81□□□□□ -1.64
LIMA1-205ENST00000550592 ARSEP51690 589 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 MVPQ14764 893 aaKnown RBP4.81□□□□□ -1.64
LIMA1-205ENST00000550592 PLCB4Q15147 1175 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 KYNUQ16719 465 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 FAM133BQ5BKY9 247 aaKnown RBP4.81□□□□□ -1.64
LIMA1-205ENST00000550592 XKR9Q5GH70 373 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 KCNT1Q5JUK3 1230 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 AWAT2Q6E213 333 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 RGMBQ6NW40 437 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 FAM122CQ6P4D5 195 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 FJX1Q86VR8 437 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 GCSAMQ8N6F7 178 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 EMC1Q8N766 993 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 THAP6Q8TBB0 222 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 DNAAF4Q8WXU2 420 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 DGAT2Q96PD7 388 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 CSF3RQ99062 836 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 CMKLR1Q99788 373 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 SPATC1LQ9H0A9 340 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 KCNK15Q9H427 330 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 MRPL44Q9H9J2 332 aaKnown RBP4.81□□□□□ -1.64
LIMA1-205ENST00000550592 TAB2Q9NYJ8 693 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms