RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TRBV5-4A0A0C4DH59 114 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 CCDC78A2IDD5 438 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 HEATR9A2RTY3 570 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 KIF5CO60282 957 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 VIPP01282 170 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 ZSCAN5DPP0CG00 497 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 HGFP14210 728 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 BRAFP15056 766 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 ABCG1P45844 678 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 MAPK9P45984 424 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 LIMK2P53671 638 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 BASP1P80723 227 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 CACNG1Q06432 222 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 CCDC173Q0VFZ6 552 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 SKIDA1Q1XH10 827 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 CCDC38Q502W7 563 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 RASGEF1CQ8N431 466 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 PRELID2Q8N945 189 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 SGF29Q96ES7 293 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 PDLIM2Q96JY6 352 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 CASS4Q9NQ75 786 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 IGSF10Q6WRI0 2623 aa16.92■□□□□ 0.3
CHMP1A-208ENST00000550102 IGLV3-16A0A075B6K0 115 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 OR52A4PA6NMU1 304 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 PGRMC1O00264 195 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 THRAP10827 490 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 HOXB3P14651 431 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 PSMA3P25788 255 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 ACRV1P26436 265 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 SLC19A1P41440 591 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 KCNJ1P48048 391 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 PRLHRP49683 370 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 NFE2L1Q14494 772 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 C16orf72Q14CZ0 275 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 WDR74Q6RFH5 385 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 C19orf48Q6RUI8 117 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 ZNF574Q6ZN55 896 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 FAM83HQ6ZRV2 1179 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 TMEM26Q6ZUK4 368 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 JAMLQ86YT9 394 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 RBM12BQ8IXT5 1001 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 SLC35F6Q8N357 371 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 BEND7Q8N7W2 519 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 HNRNPLLQ8WVV9 542 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 CDKN2AIPNLQ96HQ2 116 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 RANBP9Q96S59 729 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 VPS37BQ9H9H4 285 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 TRMT1Q9NXH9 659 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 ZDHHC3Q9NYG2 299 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 ZNF624Q9P2J8 865 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 TTC7AQ9ULT0 858 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 PCDHGA7Q9Y5G6 932 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 LAMA5O15230 3695 aa16.91■□□□□ 0.3
CHMP1A-208ENST00000550102 MGAT4DA6NG13 374 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 ATP1B2P14415 290 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 ADRA1DP25100 572 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 GRIA1P42261 906 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 ARSDP51689 593 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 CFHR1Q03591 330 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 COL28A1Q2UY09 1125 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 TMEM71Q6P5X7 295 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 AFTPHQ6ULP2 937 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 NLRP9Q7RTR0 991 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 TAS2R42Q7RTR8 314 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 SERPINA9Q86WD7 417 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 AGBL5Q8NDL9 886 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 RCBTB1Q8NDN9 531 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 PPHLN1Q8NEY8 458 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 OR2L2Q8NH16 312 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 HM13Q8TCT9 377 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 KCNE4Q8WWG9 221 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 NCSTNQ92542 709 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 CCDC97Q96F63 343 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 MS4A14Q96JA4 679 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 TBC1D10AQ9BXI6 508 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 SLC40A1Q9NP59 571 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 TMEM9Q9P0T7 183 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 FAM8A1Q9UBU6 413 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 PSMD13Q9UNM6 376 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 LHX6Q9UPM6 363 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 WDR37Q9Y2I8 494 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 TCAF1Q9Y4C2 921 aa16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 MN1Q10571 1320 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-208ENST00000550102 ZFHX4Q86UP3 3567 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 AP3B1O00203 1094 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 AGRPO00253 132 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 SGTAO43765 313 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 SLC35G4P0C7Q5 338 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 ITIH1P19827 911 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 CDKN1CP49918 316 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 CDK16Q00536 496 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 GPR18Q14330 331 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 DBN1Q16643 649 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 METRNLQ641Q3 311 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 SPACA3Q8IXA5 215 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 PIANPQ8IYJ0 282 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms