RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 FUOMA2VDF0 154 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 SYCE1LA8MT33 242 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 IQCF5A8MTL0 148 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 TSPAN12O95859 305 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 SERPINF2P08697 491 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 HOXB8P17481 243 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 PIGAP37287 484 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 ZNF140P52738 457 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 GRSF1Q12849 480 aaKnown RBP eCLIP13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 MAP2K5Q13163 448 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 NKG7Q16617 165 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 MEP1AQ16819 746 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 BROXQ5VW32 411 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 MRPL10Q7Z7H8 261 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 LINGO1Q96FE5 620 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 SUSD3Q96L08 255 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 TUBA1CQ9BQE3 449 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 NUSAP1Q9BXS6 441 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 DGCR6LQ9BY27 220 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 BPIFA1Q9NP55 256 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 EXD2Q9NVH0 621 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 PCDHB3Q9Y5E6 796 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 PCDHGA8Q9Y5G5 932 aa13.97□□□□□ -0.17
RAPGEF3-218ENST00000548919 TYW5A2RUC4 315 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 PRAMEF11O60813 436 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 KATNA1O75449 491 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 MLYCDO95822 493 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 CRHBPP24387 322 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 PLA2G16P53816 162 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 C10orf120Q5SQS8 335 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 IL27RAQ6UWB1 636 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 GLT6D1Q7Z4J2 308 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 GPSM1Q86YR5 675 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 OR56A4Q8NGH8 313 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 BTN2A3PQ96KV6 586 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 YTHDF1Q9BYJ9 559 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 PFDN4Q9NQP4 134 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 NLE1Q9NVX2 485 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 ZIM2Q9NZV7 527 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 SLC45A1Q9Y2W3 748 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 TRPM7Q96QT4 1865 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 SLC12A8A0AV02 714 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 XYLBO75191 536 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 DEAF1O75398 565 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 CAPN1P07384 714 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 HTR1AP08908 422 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 CNPP09543 421 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 TMBIM6P55061 237 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 RELAQ04206 551 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 GRIK2Q13002 908 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 ITGADQ13349 1161 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 CRY1Q16526 586 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 FXNQ16595 210 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 GNASQ5JWF2 1037 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 MORN1Q5T089 497 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 GRAMD4Q6IC98 578 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 USP50Q70EL3 339 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 BTLAQ7Z6A9 289 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 THAP5Q7Z6K1 395 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 ATP6V0D2Q8N8Y2 350 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 ZBTB8BQ8NAP8 495 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 TRIB3Q96RU7 358 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 ADAM2Q99965 735 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 TMEM165Q9HC07 324 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 TMEM9Q9P0T7 183 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 MAGEL2Q9UJ55 1249 aa13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 POLR3HQ9Y535 204 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-218ENST00000548919 STX16O14662 325 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 AXIN1O15169 862 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 GPR182O15218 404 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 DFNA5O60443 496 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 NDST3O95803 873 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 RAP2AP10114 183 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 AGXTP21549 392 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 GGT5P36269 586 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 THPOP40225 353 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 CTU2Q2VPK5 515 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 NADSYN1Q6IA69 706 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 DNAJC14Q6Y2X3 702 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 ZNF280BQ86YH2 543 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 SPARTQ8N0X7 666 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 ATAD1Q8NBU5 361 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 OR7D4Q8NG98 312 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 METTL6Q8TCB7 284 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 PNPT1Q8TCS8 783 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 PARK7Q99497 189 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 CGREF1Q99674 301 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 AMBRA1Q9C0C7 1298 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 RIC8BQ9NVN3 520 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 VAPAQ9P0L0 249 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 MARCH2Q9P0N8 246 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 NEUROG3Q9Y4Z2 214 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 GREB1Q4ZG55 1949 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 G3V2T6 193 aa13.95□□□□□ -0.18
RAPGEF3-218ENST00000548919 ABCB7O75027 752 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms