RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PHKG1Q16816 387 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 CTSL3PQ5NE16 218 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 LDLRAP1Q5SW96 308 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 KIAA2013Q8IYS2 634 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF366Q8N895 744 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 FAM162AQ96A26 154 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 MAGEH1Q9H213 219 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 TMEM161AQ9NX61 479 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 EBF1Q9UH73 591 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 MED16Q9Y2X0 877 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 OR6C75A6NL08 312 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 FXYD1O00168 92 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 DFNA5O60443 496 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 DIRAS1O95057 198 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ITPKAP23677 461 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 C16orf72Q14CZ0 275 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 SPESP1Q6UW49 350 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 NKAPQ8N5F7 415 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ITFG1Q8TB96 612 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 CD200R1Q8TD46 325 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 L3HYPDHQ96EM0 354 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 BIRC8Q96P09 236 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 RPF2Q9H7B2 306 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 NLE1Q9NVX2 485 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 PCTPQ9UKL6 214 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 PRSS21Q9Y6M0 314 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 PRMT5O14744 637 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 SYN3O14994 580 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 TRMUO75648 421 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ESRRBO95718 433 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ALBP02768 609 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 TFPTP0C1Z6 253 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 SLC5A2P31639 672 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 MAPKAPK2P49137 400 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 CDH4P55283 916 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ARF5P84085 180 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 RFTN1Q14699 578 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 TAF1AQ15573 450 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 DHRSXQ8N5I4 330 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 LMNTD1Q8N9Z9 388 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 BBS2Q9BXC9 721 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 SMURF2Q9HAU4 748 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 CPQQ9Y646 472 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 NYNRINQ9P2P1 1898 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 CLDN11O75508 207 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 VNN2O95498 520 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF682O95780 498 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 PBLDP30039 288 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 HTR7P34969 479 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF140P52738 457 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 LSM3P62310 102 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 HTRA3P83110 453 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 GTF2H2Q13888 395 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 VEPH1Q14D04 833 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 GTF2H2CQ6P1K8 395 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 GALNT5Q7Z7M9 940 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 CACUL1Q86Y37 369 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 SFRP1Q8N474 314 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 CD300AQ9UGN4 299 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 CLEC4EQ9ULY5 219 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 ZFC3H1O60293 1989 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 MYLKQ15746 1914 aa13.48□□□□□ -0.25
PRPF40B-209ENST00000548825 A0A1B0GVM2 712 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 INHAP05111 366 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 CSRP3P50461 194 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 MERTKQ12866 999 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SETMARQ53H47 684 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 PYCR3Q53H96 274 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ADGRF1Q5T601 910 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 KANK2Q63ZY3 851 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 AHI1Q8N157 1196 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 FAM86B1Q8N7N1 296 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 BPIFB6Q8NFQ5 453 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 BIRC7Q96CA5 298 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 CCDC138Q96M89 665 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 EBPLQ9BY08 206 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 NAA50Q9GZZ1 169 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 CLK4Q9HAZ1 481 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ZFYVE1Q9HBF4 777 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 VPS51Q9UID3 782 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 TDRKHQ9Y2W6 561 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 VCANP13611 3396 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 A0A1W2PP18 115 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SLC22A2O15244 555 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 FFAR2O15552 330 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 RSL1D1O76021 490 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms