RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CFAP20Q9Y6A4 193 aaKnown RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 ZFYVE26Q68DK2 2539 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 CCDC162PA2VCL2 907 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 MROH6A6NGR9 719 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 PRR19A6NJB7 356 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 OR5K4A6NMS3 321 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 A8MU76 341 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 ZNF185O15231 689 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 DUX1O43812 170 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 TYRP1P17643 537 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 MSNP26038 577 aaKnown RBP15.49■□□□□ 0.07
DDX54-205ENST00000548786 ETV5P41161 510 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 SLC19A1P41440 591 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 UBE2IP63279 158 aaKnown RBP15.49■□□□□ 0.07
DDX54-205ENST00000548786 ZFP36L1Q07352 338 aaKnown RBP15.49■□□□□ 0.07
DDX54-205ENST00000548786 CLCA4Q14CN2 919 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 COL28A1Q2UY09 1125 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 PIANPQ8IYJ0 282 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 LSMEM2Q8N112 164 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 STYXQ8WUJ0 223 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 MAGOHBQ96A72 148 aaKnown RBP15.49■□□□□ 0.07
DDX54-205ENST00000548786 CDKN2AIPNLQ96HQ2 116 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 PDLIM2Q96JY6 352 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 ZNF778Q96MU6 729 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 SLC46A1Q96NT5 459 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 OSBPL9Q96SU4 736 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 CASS4Q9NQ75 786 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 THSD1Q9NS62 852 aa15.49■□□□□ 0.07
DDX54-205ENST00000548786 HEATR9A2RTY3 570 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 TMX2-CTNND1H3BSU7 103 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 PGRMC1O00264 195 aaKnown RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 RRP8O43159 456 aaKnown RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 SGTAO43765 313 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 POLBP06746 335 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 RALBP11234 206 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 ACRV1P26436 265 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 HALP42357 657 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 PCBP4P57723 403 aaKnown RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 GPLD1P80108 840 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 CACNG1Q06432 222 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 DBN1Q16643 649 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 SKIDA1Q1XH10 827 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 DUS1LQ6P1R4 473 aaKnown RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 RASGEF1CQ8N431 466 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 LILRA3Q8N6C8 439 aaPredicted RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 CLDN19Q8N6F1 224 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 GPR150Q8NGU9 434 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 SNIP1Q8TAD8 396 aaKnown RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 HDAC10Q969S8 669 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 SH3KBP1Q96B97 665 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 ZNF578Q96N58 590 aaPredicted RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 WWP1Q9H0M0 922 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 IMP3Q9NV31 184 aaKnown RBP15.48■□□□□ 0.07
DDX54-205ENST00000548786 ZDHHC3Q9NYG2 299 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 PCDHGA8Q9Y5G5 932 aa15.48■□□□□ 0.07
DDX54-205ENST00000548786 TCRBV7S3A2A0A539 114 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 AGAP14A8MT82 685 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 CFAP99D6REC4 459 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 DXOO77932 396 aaKnown RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 KRT14P02533 472 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 ITGA2BP08514 1039 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 CCL4P13236 92 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 ATP1B2P14415 290 aaPredicted RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 XRCC1P18887 633 aaPredicted RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 LIMK2P53671 638 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 GPS1Q13098 491 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 GPR18Q14330 331 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 GPR33Q49SQ1 333 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 TSTD2Q5T7W7 516 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 ABRAXAS1Q6UWZ7 409 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 LRRC69Q6ZNQ3 347 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 TMEM26Q6ZUK4 368 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 PPHLN1Q8NEY8 458 aaKnown RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 OR4D9Q8NGE8 314 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 OR13J1Q8NGT2 312 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 ZNF514Q96K75 400 aaPredicted RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 CMKLR1Q99788 373 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.47■□□□□ 0.07
DDX54-205ENST00000548786 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 TCAF1Q9Y4C2 921 aa15.47■□□□□ 0.07
DDX54-205ENST00000548786 A0A087WV48 116 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 TRBV5-4A0A0C4DH59 114 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 MGAT4DA6NG13 374 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 H7C0S8 307 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 GOT2P00505 430 aaKnown RBP15.46■□□□□ 0.07
DDX54-205ENST00000548786 THRAP10827 490 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 ADRA1DP25100 572 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 MGAT1P26572 445 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 SLC5A2P31639 672 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 ABCG1P45844 678 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 GFERP55789 205 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 ERVPABLB-1P60509 514 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 DMPKQ09013 629 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 EIF3IQ13347 325 aaKnown RBP15.46■□□□□ 0.07
DDX54-205ENST00000548786 RPE65Q16518 533 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 BCL7AQ4VC05 210 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 AGAP9Q5VTM2 703 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 FAM129CQ86XR2 697 aa15.46■□□□□ 0.07
DDX54-205ENST00000548786 SPACA3Q8IXA5 215 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms